Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 MTATP8P2-201ENST00000435212 202 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 AC055731.1-201ENST00000474387 401 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 RNA5SP33-201ENST00000516687 98 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 DEFB131E-201ENST00000532329 154 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 MIR548AE2-201ENST00000583456 67 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ITGA1P56199 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ITGA1P56199 RNU6-363P-201ENST00000362895 105 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 Y_RNA.107-201ENST00000363190 121 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 RNU4-67P-201ENST00000364569 141 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 RNU6-360P-201ENST00000390944 104 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 SNORD77B-201ENST00000391112 67 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 SNORA74.3-201ENST00000517108 154 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 FAM71BP1-201ENST00000604431 523 ntBASIC2.03□□□□□ -2.08
ITGA1P56199 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.03□□□□□ -2.08
ITGA1P56199 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ITGA1P56199 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
ITGA1P56199 RNU6-1123P-201ENST00000362347 106 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNY3P2-201ENST00000362918 102 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 Y_RNA.93-201ENST00000363066 109 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNU6-1099P-201ENST00000363533 107 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNU6-409P-201ENST00000384114 104 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNU6-733P-201ENST00000410759 104 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ITGA1P56199 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
ITGA1P56199 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 Y_RNA.558-201ENST00000384685 113 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 snoU13.16-201ENST00000459350 104 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 RNA5SP57-201ENST00000459463 123 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 SCARNA23-201ENST00000516060 130 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 RNU7-43P-201ENST00000516554 64 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 MIR4694-201ENST00000578534 80 ntBASIC2.01□□□□□ -2.09
ITGA1P56199 Y_RNA.10-201ENST00000362371 110 ntBASIC2□□□□□ -2.09
ITGA1P56199 Y_RNA.220-201ENST00000364244 109 ntBASIC2□□□□□ -2.09
ITGA1P56199 SNORD73B-201ENST00000364394 72 ntBASIC2□□□□□ -2.09
ITGA1P56199 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
ITGA1P56199 Y_RNA.360-201ENST00000365512 102 ntBASIC2□□□□□ -2.09
ITGA1P56199 RNU6-616P-201ENST00000384353 107 ntBASIC2□□□□□ -2.09
ITGA1P56199 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
ITGA1P56199 RPS3AP1-201ENST00000413190 320 ntBASIC2□□□□□ -2.09
ITGA1P56199 HMGN1P33-201ENST00000432945 451 ntBASIC2□□□□□ -2.09
ITGA1P56199 MIR1270-201ENST00000459320 83 ntBASIC2□□□□□ -2.09
ITGA1P56199 RNU6-917P-201ENST00000516294 104 ntBASIC2□□□□□ -2.09
ITGA1P56199 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ITGA1P56199 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ITGA1P56199 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
ITGA1P56199 RNU6-832P-201ENST00000363319 107 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 RNU6-203P-201ENST00000384038 104 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 Y_RNA.466-201ENST00000384294 113 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 MIR605-201ENST00000385078 83 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 MIR577-201ENST00000385196 96 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 Y_RNA.601-201ENST00000410500 113 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.99□□□□□ -2.09
ITGA1P56199 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 MIR4287-201ENST00000579398 78 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 MALAT1.1-201ENST00000618249 95 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 AC008133.2-201ENST00000624540 351 ntBASIC1.99□□□□□ -2.09
ITGA1P56199 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
ITGA1P56199 SNORA1.1-201ENST00000364671 133 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 SNORA32-201ENST00000384072 121 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 SNORA7.5-201ENST00000410672 110 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 AL353813.1-201ENST00000440700 253 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 MIR4764-201ENST00000580680 88 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 MIR8055-201ENST00000610739 97 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.98□□□□□ -2.09
ITGA1P56199 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ITGA1P56199 AP000648.3-201ENST00000623539 4507 ntBASIC1.98□□□□□ -2.09
ITGA1P56199 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
ITGA1P56199 Y_RNA.342-201ENST00000365352 113 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 RNY1P7-201ENST00000384743 110 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 MIR194-1-201ENST00000384892 85 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 RNU6-679P-201ENST00000391003 106 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
ITGA1P56199 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
ITGA1P56199 AL442128.1-201ENST00000615151 90 ntBASIC1.97□□□□□ -2.09
ITGA1P56199 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ITGA1P56199 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ITGA1P56199 MIR520C-201ENST00000385005 87 ntBASIC1.96□□□□□ -2.1
ITGA1P56199 AC004965.1-201ENST00000413033 213 ntBASIC1.96□□□□□ -2.1
ITGA1P56199 RNU6-844P-201ENST00000517175 102 ntBASIC1.96□□□□□ -2.1
ITGA1P56199 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ITGA1P56199 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms