Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP001328.1-201ENST00000528550 176 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 MIR4524B-201ENST00000581569 115 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 AC008163.1-202ENST00000636004 2889 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 RNU6-580P-201ENST00000365159 107 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 Y_RNA.420-201ENST00000384043 110 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 RNU6-346P-201ENST00000516288 111 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 MIR3121-201ENST00000579680 77 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 MIR6841-201ENST00000637129 72 ntBASIC1.29□□□□□ -2.2
SUMO3P55854 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.28□□□□□ -2.2
SUMO3P55854 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 RNU6-746P-201ENST00000384112 109 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 SNORD111-201ENST00000408139 94 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 Y_RNA.651-201ENST00000459380 103 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 AL512598.1-201ENST00000610158 273 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SUMO3P55854 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
SUMO3P55854 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SUMO3P55854 SNORA22.1-201ENST00000362701 134 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 RNU6-690P-201ENST00000365242 106 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 RNU6-426P-201ENST00000516464 97 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 Y_RNA.703-201ENST00000516846 111 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
SUMO3P55854 RNU6-508P-201ENST00000363231 103 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 RNU4-16P-201ENST00000364737 141 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 Y_RNA.568-201ENST00000384742 113 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 Y_RNA.757-201ENST00000578934 114 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 AC010332.2-201ENST00000613083 1904 ntBASIC1.26□□□□□ -2.21
SUMO3P55854 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 RNU6-205P-201ENST00000390858 107 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 RNA5SP144-201ENST00000410846 116 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 POLR2J4-204ENST00000418424 324 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 AC133485.4-201ENST00000561835 220 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 AC138907.4-201ENST00000570107 226 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 U7.2-201ENST00000607576 63 ntBASIC1.25□□□□□ -2.21
SUMO3P55854 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SUMO3P55854 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SUMO3P55854 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
SUMO3P55854 SNORD50.2-201ENST00000365465 70 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RNA5SP95-201ENST00000410319 137 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RPS23P4-201ENST00000487908 423 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RNU6-240P-201ENST00000516098 97 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 AC023827.1-201ENST00000569247 97 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 MIR3133-201ENST00000583157 78 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 TUG1_4.1-201ENST00000619464 181 ntBASIC1.24□□□□□ -2.21
SUMO3P55854 SNORD12C-201ENST00000386307 89 ntBASIC1.23□□□□□ -2.21
SUMO3P55854 AL022718.1-201ENST00000412004 84 ntBASIC1.23□□□□□ -2.21
SUMO3P55854 RNU5E-3P-201ENST00000515913 68 ntBASIC1.23□□□□□ -2.21
SUMO3P55854 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.23□□□□□ -2.21
SUMO3P55854 MIR4305-201ENST00000583252 102 ntBASIC1.23□□□□□ -2.21
SUMO3P55854 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.23□□□□□ -2.21
SUMO3P55854 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 SNORA40-201ENST00000388090 126 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 MIR548M-201ENST00000408260 86 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 RNU4-62P-201ENST00000410125 130 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 RNU7-62P-201ENST00000458856 62 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 RNA5SP272-201ENST00000516095 111 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 AC021443.1-201ENST00000604478 211 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
SUMO3P55854 RNU6-774P-201ENST00000363238 107 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 RNA5SP99-201ENST00000364020 114 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 MIR588-201ENST00000384900 83 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 MIR613-201ENST00000385248 95 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
SUMO3P55854 MTND4LP9-201ENST00000427694 174 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 MIR6740-201ENST00000618268 113 ntBASIC1.21□□□□□ -2.22
SUMO3P55854 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.21□□□□□ -2.22
SUMO3P55854 SNORD115-2-201ENST00000362842 82 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 Y_RNA.114-201ENST00000363265 113 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 RNU6-647P-201ENST00000364243 107 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 SNORD115-20-201ENST00000365099 82 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 MIR563-201ENST00000385080 79 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 RNU6-257P-201ENST00000410238 98 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 RNU6-1258P-201ENST00000516911 111 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 AL137067.1-201ENST00000615933 120 ntBASIC1.2□□□□□ -2.22
SUMO3P55854 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms