Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNA5SP272-201ENST00000516095 111 ntBASIC1.4□□□□□ -2.19
COPAP53621 Y_RNA.692-201ENST00000516627 105 ntBASIC1.4□□□□□ -2.19
COPAP53621 RNU2-60P-201ENST00000517290 128 ntBASIC1.4□□□□□ -2.19
COPAP53621 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
COPAP53621 RNA5SP264-201ENST00000363115 107 ntBASIC1.39□□□□□ -2.19
COPAP53621 RNY1P6-201ENST00000384193 109 ntBASIC1.39□□□□□ -2.19
COPAP53621 SNORA40-201ENST00000388090 126 ntBASIC1.39□□□□□ -2.19
COPAP53621 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
COPAP53621 Y_RNA.757-201ENST00000578934 114 ntBASIC1.39□□□□□ -2.19
COPAP53621 MIR548AO-201ENST00000579992 96 ntBASIC1.39□□□□□ -2.19
COPAP53621 AC011603.4-201ENST00000611325 277 ntBASIC1.39□□□□□ -2.19
COPAP53621 AC091895.1-201ENST00000624494 256 ntBASIC1.39□□□□□ -2.19
COPAP53621 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.38□□□□□ -2.19
COPAP53621 SNORA1.1-201ENST00000364671 133 ntBASIC1.38□□□□□ -2.19
COPAP53621 RNU6-53P-201ENST00000365367 106 ntBASIC1.38□□□□□ -2.19
COPAP53621 RNU6-187P-201ENST00000384139 106 ntBASIC1.38□□□□□ -2.19
COPAP53621 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
COPAP53621 RNU6-910P-201ENST00000390844 107 ntBASIC1.38□□□□□ -2.19
COPAP53621 RNU6-913P-201ENST00000390913 95 ntBASIC1.38□□□□□ -2.19
COPAP53621 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
COPAP53621 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
COPAP53621 AL022345.2-201ENST00000606307 135 ntBASIC1.38□□□□□ -2.19
COPAP53621 U7.2-201ENST00000607576 63 ntBASIC1.38□□□□□ -2.19
COPAP53621 TUG1_4.1-201ENST00000619464 181 ntBASIC1.38□□□□□ -2.19
COPAP53621 RNU6-690P-201ENST00000365242 106 ntBASIC1.37□□□□□ -2.19
COPAP53621 SNORD50.2-201ENST00000365465 70 ntBASIC1.37□□□□□ -2.19
COPAP53621 MIR1276-201ENST00000408707 83 ntBASIC1.37□□□□□ -2.19
COPAP53621 RNU6-113P-201ENST00000516653 101 ntBASIC1.37□□□□□ -2.19
COPAP53621 PRELID3BP2-201ENST00000605362 201 ntBASIC1.37□□□□□ -2.19
COPAP53621 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
COPAP53621 RNU6-309P-201ENST00000364573 106 ntBASIC1.36□□□□□ -2.19
COPAP53621 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
COPAP53621 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.36□□□□□ -2.19
COPAP53621 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
COPAP53621 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
COPAP53621 RNU11-2P-201ENST00000516898 142 ntBASIC1.36□□□□□ -2.19
COPAP53621 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.36□□□□□ -2.19
COPAP53621 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
COPAP53621 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
COPAP53621 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COPAP53621 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
COPAP53621 RNU6-704P-201ENST00000364162 103 ntBASIC1.35□□□□□ -2.19
COPAP53621 RNU4-16P-201ENST00000364737 141 ntBASIC1.35□□□□□ -2.19
COPAP53621 RNU6-396P-201ENST00000365369 105 ntBASIC1.35□□□□□ -2.19
COPAP53621 MIR1185-1-201ENST00000408598 86 ntBASIC1.35□□□□□ -2.19
COPAP53621 RNU6-257P-201ENST00000410238 98 ntBASIC1.35□□□□□ -2.19
COPAP53621 MTND4LP9-201ENST00000427694 174 ntBASIC1.35□□□□□ -2.19
COPAP53621 HMGN1P33-201ENST00000432945 451 ntBASIC1.35□□□□□ -2.19
COPAP53621 RNU7-45P-201ENST00000459460 63 ntBASIC1.35□□□□□ -2.19
COPAP53621 AP003716.2-201ENST00000528260 108 ntBASIC1.35□□□□□ -2.19
COPAP53621 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
COPAP53621 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
COPAP53621 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
COPAP53621 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-1190P-201ENST00000410811 104 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
COPAP53621 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-893P-201ENST00000458841 100 ntBASIC1.34□□□□□ -2.19
COPAP53621 Y_RNA.651-201ENST00000459380 103 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
COPAP53621 MIR2115-201ENST00000516657 100 ntBASIC1.34□□□□□ -2.19
COPAP53621 MIR8055-201ENST00000610739 97 ntBASIC1.34□□□□□ -2.19
COPAP53621 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.34□□□□□ -2.19
COPAP53621 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
COPAP53621 Z97988.1-201ENST00000637697 135 ntBASIC1.34□□□□□ -2.19
COPAP53621 RNU6-349P-201ENST00000362402 107 ntBASIC1.33□□□□□ -2.2
COPAP53621 Y_RNA.354-201ENST00000365448 111 ntBASIC1.33□□□□□ -2.2
COPAP53621 SNORD38B-201ENST00000384690 67 ntBASIC1.33□□□□□ -2.2
COPAP53621 SNORA75.2-201ENST00000391138 150 ntBASIC1.33□□□□□ -2.2
COPAP53621 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
COPAP53621 SNORA75.3-201ENST00000391231 150 ntBASIC1.33□□□□□ -2.2
COPAP53621 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
COPAP53621 AL392103.1-201ENST00000447000 198 ntBASIC1.33□□□□□ -2.2
COPAP53621 AC133485.4-201ENST00000561835 220 ntBASIC1.33□□□□□ -2.2
COPAP53621 AC138907.4-201ENST00000570107 226 ntBASIC1.33□□□□□ -2.2
COPAP53621 MIR3121-201ENST00000579680 77 ntBASIC1.33□□□□□ -2.2
COPAP53621 HSPE1P19-201ENST00000603327 295 ntBASIC1.33□□□□□ -2.2
COPAP53621 SNORD38B-202ENST00000625943 69 ntBASIC1.33□□□□□ -2.2
COPAP53621 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COPAP53621 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
COPAP53621 MIR539-201ENST00000365690 78 ntBASIC1.32□□□□□ -2.2
COPAP53621 SNORA26.6-201ENST00000391256 115 ntBASIC1.32□□□□□ -2.2
COPAP53621 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
COPAP53621 TMSB4XP3-201ENST00000445144 114 ntBASIC1.32□□□□□ -2.2
COPAP53621 RNU6-240P-201ENST00000516098 97 ntBASIC1.32□□□□□ -2.2
COPAP53621 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
COPAP53621 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
COPAP53621 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
COPAP53621 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
COPAP53621 RNU6-647P-201ENST00000364243 107 ntBASIC1.31□□□□□ -2.2
COPAP53621 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
COPAP53621 Y_RNA.586-201ENST00000391146 98 ntBASIC1.31□□□□□ -2.2
COPAP53621 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
COPAP53621 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
COPAP53621 AC021443.1-201ENST00000604478 211 ntBASIC1.31□□□□□ -2.2
COPAP53621 SEPT14P17-201ENST00000617978 177 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms