Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR4251-201ENST00000635819 61 ntBASIC2.68□□□□□ -1.98
RNF144AP50876 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF144AP50876 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF144AP50876 RNA5SP133-201ENST00000363368 119 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 SNORA48.2-201ENST00000390926 124 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 AC019129.1-201ENST00000403786 261 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 SNORD4B-201ENST00000459083 72 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 RNU6-917P-201ENST00000516294 104 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 MIR3935-201ENST00000583472 104 ntBASIC2.67□□□□□ -1.98
RNF144AP50876 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RNF144AP50876 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF144AP50876 HMGN2P39-201ENST00000398005 273 ntBASIC2.66□□□□□ -1.98
RNF144AP50876 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.66□□□□□ -1.98
RNF144AP50876 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF144AP50876 AC006023.1-201ENST00000603944 259 ntBASIC2.66□□□□□ -1.98
RNF144AP50876 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF144AP50876 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
RNF144AP50876 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF144AP50876 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RNF144AP50876 Y_RNA.57-201ENST00000362806 113 ntBASIC2.65□□□□□ -1.99
RNF144AP50876 RNU6-478P-201ENST00000363904 110 ntBASIC2.65□□□□□ -1.99
RNF144AP50876 RNY1P2-201ENST00000364820 117 ntBASIC2.65□□□□□ -1.99
RNF144AP50876 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
RNF144AP50876 AL450471.1-201ENST00000447509 127 ntBASIC2.65□□□□□ -1.99
RNF144AP50876 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RNF144AP50876 MIR4500-201ENST00000579472 76 ntBASIC2.64□□□□□ -1.99
RNF144AP50876 AC090897.1-201ENST00000580909 226 ntBASIC2.64□□□□□ -1.99
RNF144AP50876 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.64□□□□□ -1.99
RNF144AP50876 AL662814.1-201ENST00000617364 121 ntBASIC2.64□□□□□ -1.99
RNF144AP50876 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF144AP50876 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
RNF144AP50876 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
RNF144AP50876 AL365361.1-201ENST00000566942 3481 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RNF144AP50876 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNF144AP50876 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 EEF1A1P41-201ENST00000414667 207 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 snoU13.11-201ENST00000459219 104 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 S100A11P2-201ENST00000467589 312 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 RPS27P21-201ENST00000486977 252 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 AL512598.1-201ENST00000610158 273 ntBASIC2.63□□□□□ -1.99
RNF144AP50876 RNU6-624P-201ENST00000363411 107 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 RNU1-51P-201ENST00000365345 176 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 RNU6-949P-201ENST00000384040 107 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 RNU4-83P-201ENST00000410863 133 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 U1.36-201ENST00000620684 176 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 AL137790.1-201ENST00000634283 177 ntBASIC2.62□□□□□ -1.99
RNF144AP50876 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF144AP50876 Y_RNA.508-201ENST00000384502 114 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 AC003982.1-202ENST00000469928 248 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 RNU7-41P-201ENST00000515917 61 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 RNU6-322P-201ENST00000516010 103 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
RNF144AP50876 RNU6-1123P-201ENST00000362347 106 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 RNU6-380P-201ENST00000410207 107 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 Z98742.3-201ENST00000418637 326 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF144AP50876 AC009474.2-201ENST00000451383 136 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 AC114801.3-201ENST00000510231 177 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 RNA5SP445-201ENST00000515889 115 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 DEFB122-202ENST00000569013 197 ntBASIC2.6□□□□□ -1.99
RNF144AP50876 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RNF144AP50876 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF144AP50876 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF144AP50876 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF144AP50876 RNU6-360P-201ENST00000390944 104 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 RNU7-85P-201ENST00000458851 63 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 AC004223.1-201ENST00000479840 271 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 RNU6-850P-201ENST00000516934 103 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
RNF144AP50876 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF144AP50876 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF144AP50876 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
RNF144AP50876 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
RNF144AP50876 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.58□□□□□ -2
RNF144AP50876 RNA5SP100-201ENST00000410903 110 ntBASIC2.58□□□□□ -2
RNF144AP50876 RNA5SP59-201ENST00000410922 110 ntBASIC2.58□□□□□ -2
RNF144AP50876 SNRPGP12-201ENST00000449481 213 ntBASIC2.58□□□□□ -2
RNF144AP50876 AC023790.1-201ENST00000482174 347 ntBASIC2.58□□□□□ -2
RNF144AP50876 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
RNF144AP50876 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
RNF144AP50876 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.58□□□□□ -2
RNF144AP50876 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
RNF144AP50876 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
RNF144AP50876 AC138749.4-201ENST00000563970 127 ntBASIC2.58□□□□□ -2
RNF144AP50876 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
RNF144AP50876 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.58□□□□□ -2
RNF144AP50876 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.58□□□□□ -2
RNF144AP50876 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
RNF144AP50876 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RNF144AP50876 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
RNF144AP50876 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
RNF144AP50876 AC244023.1-201ENST00000426884 112 ntBASIC2.57□□□□□ -2
RNF144AP50876 snoU13.2-201ENST00000459201 104 ntBASIC2.57□□□□□ -2
RNF144AP50876 Y_RNA.648-201ENST00000459455 110 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms