Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.43□□□□□ -2.64
HTTP42858 MTND2P3-201ENST00000452458 470 ntBASIC-1.43□□□□□ -2.64
HTTP42858 AC091179.3-201ENST00000474761 144 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU7-175P-201ENST00000515915 61 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU7-35P-201ENST00000517174 62 ntBASIC-1.43□□□□□ -2.64
HTTP42858 MIR3123-201ENST00000583417 75 ntBASIC-1.43□□□□□ -2.64
HTTP42858 AP003357.1-201ENST00000604497 148 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU6-85P-201ENST00000605989 107 ntBASIC-1.43□□□□□ -2.64
HTTP42858 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU6-903P-201ENST00000391270 109 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.43□□□□□ -2.64
HTTP42858 AC113618.1-201ENST00000416747 285 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU6-559P-201ENST00000516151 98 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.43□□□□□ -2.64
HTTP42858 MIR5708-201ENST00000579723 85 ntBASIC-1.43□□□□□ -2.64
HTTP42858 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.43□□□□□ -2.64
HTTP42858 AL158209.2-201ENST00000619266 216 ntBASIC-1.43□□□□□ -2.64
HTTP42858 MIR5683-201ENST00000636514 76 ntBASIC-1.43□□□□□ -2.64
HTTP42858 AL445984.1-201ENST00000637834 659 ntBASIC-1.43□□□□□ -2.64
HTTP42858 FGF7P2-201ENST00000332473 296 ntBASIC-1.44□□□□□ -2.64
HTTP42858 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.44□□□□□ -2.64
HTTP42858 SNORD115-30-201ENST00000364117 82 ntBASIC-1.44□□□□□ -2.64
HTTP42858 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MIR548E-201ENST00000408287 88 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MTCO3P42-201ENST00000509488 518 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MTCO3P23-201ENST00000561363 289 ntBASIC-1.44□□□□□ -2.64
HTTP42858 AC092574.1-201ENST00000609771 420 ntBASIC-1.44□□□□□ -2.64
HTTP42858 AL607023.1-201ENST00000620045 248 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MIR6888-201ENST00000621977 67 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MIR3674-201ENST00000636576 68 ntBASIC-1.44□□□□□ -2.64
HTTP42858 RNU6-673P-201ENST00000365084 104 ntBASIC-1.44□□□□□ -2.64
HTTP42858 SNORA20-201ENST00000384662 132 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MIR206-201ENST00000384872 86 ntBASIC-1.44□□□□□ -2.64
HTTP42858 AC108729.2-201ENST00000476543 840 ntBASIC-1.44□□□□□ -2.64
HTTP42858 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.44□□□□□ -2.64
HTTP42858 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.44□□□□□ -2.64
HTTP42858 SNORD42B-201ENST00000458893 67 ntBASIC-1.44□□□□□ -2.64
HTTP42858 MIR4464-201ENST00000580818 92 ntBASIC-1.44□□□□□ -2.64
HTTP42858 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.45□□□□□ -2.64
HTTP42858 SNORD61-201ENST00000384252 73 ntBASIC-1.45□□□□□ -2.64
HTTP42858 AF228730.4-201ENST00000421457 183 ntBASIC-1.45□□□□□ -2.64
HTTP42858 SNORA40.9-201ENST00000515895 93 ntBASIC-1.45□□□□□ -2.64
HTTP42858 RNU6-179P-201ENST00000363350 107 ntBASIC-1.45□□□□□ -2.64
HTTP42858 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.45□□□□□ -2.64
HTTP42858 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.45□□□□□ -2.64
HTTP42858 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.45□□□□□ -2.64
HTTP42858 MTND4LP18-201ENST00000526864 291 ntBASIC-1.45□□□□□ -2.64
HTTP42858 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.46□□□□□ -2.64
HTTP42858 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-80P-201ENST00000384195 107 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-21P-201ENST00000384710 107 ntBASIC-1.46□□□□□ -2.64
HTTP42858 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-201P-201ENST00000517100 61 ntBASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.46□□□□□ -2.64
HTTP42858 AC104010.1-201ENST00000616889 150 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNY1P16-201ENST00000363063 111 ntBASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-769P-201ENST00000384407 104 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.46□□□□□ -2.64
HTTP42858 MIR519A1-201ENST00000385257 85 ntBASIC-1.46□□□□□ -2.64
HTTP42858 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
HTTP42858 RNU6-757P-201ENST00000410334 100 ntBASIC-1.46□□□□□ -2.64
HTTP42858 MTND4LP14-201ENST00000429447 288 ntBASIC-1.46□□□□□ -2.64
HTTP42858 RNU7-80P-201ENST00000459562 61 ntBASIC-1.46□□□□□ -2.64
HTTP42858 MIR4748-201ENST00000578076 82 ntBASIC-1.46□□□□□ -2.64
HTTP42858 AL080274.1-201ENST00000605565 220 ntBASIC-1.46□□□□□ -2.64
HTTP42858 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.47□□□□□ -2.64
HTTP42858 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.47□□□□□ -2.64
HTTP42858 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.47□□□□□ -2.64
HTTP42858 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.47□□□□□ -2.64
HTTP42858 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.47□□□□□ -2.64
HTTP42858 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.47□□□□□ -2.65
HTTP42858 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.47□□□□□ -2.65
HTTP42858 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.47□□□□□ -2.65
HTTP42858 RNU6-715P-201ENST00000365204 103 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU6-298P-201ENST00000390888 96 ntBASIC-1.48□□□□□ -2.65
HTTP42858 SNORA36B-201ENST00000410438 131 ntBASIC-1.48□□□□□ -2.65
HTTP42858 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.48□□□□□ -2.65
HTTP42858 AC141846.1-201ENST00000568348 142 ntBASIC-1.48□□□□□ -2.65
HTTP42858 AC009878.1-201ENST00000621819 340 ntBASIC-1.48□□□□□ -2.65
HTTP42858 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.48□□□□□ -2.65
HTTP42858 SNORD19-201ENST00000391191 68 ntBASIC-1.48□□□□□ -2.65
HTTP42858 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU2-66P-201ENST00000410650 161 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU7-45P-201ENST00000459460 63 ntBASIC-1.48□□□□□ -2.65
HTTP42858 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.48□□□□□ -2.65
HTTP42858 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.49□□□□□ -2.65
HTTP42858 SNORA63.6-201ENST00000364921 119 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.49□□□□□ -2.65
HTTP42858 AL606923.1-201ENST00000406616 190 ntBASIC-1.49□□□□□ -2.65
HTTP42858 AC005771.1-201ENST00000585581 349 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6-90P-201ENST00000606352 106 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU4-1-201ENST00000363925 141 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNY1P12-201ENST00000364251 105 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms