Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 SNORA75-201ENST00000384158 137 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 AC009161.1-201ENST00000417306 376 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 RNU6-397P-201ENST00000516226 104 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 RNU6-365P-201ENST00000517113 106 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 MIR4460-201ENST00000577862 86 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 AL359881.1-201ENST00000602916 267 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 MIR3662-201ENST00000637030 95 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 MIR20A-201ENST00000362279 71 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 SNORD78.2-201ENST00000391076 69 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 AC016907.1-201ENST00000419483 435 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 AC024067.1-201ENST00000426199 223 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 AL445567.1-201ENST00000439121 144 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 RNU7-195P-201ENST00000458793 62 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 RNU6-864P-201ENST00000516256 108 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 RNU7-137P-201ENST00000516788 62 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 RNU6-566P-201ENST00000516790 107 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 MIR4662B-201ENST00000579498 81 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 AC073114.1-201ENST00000612027 490 ntBASIC-1.41□□□□□ -2.64
SDC4P31431 RNY3P11-201ENST00000364153 102 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 SNORD115-35-201ENST00000365122 82 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 RNY3P4-201ENST00000384428 101 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 RNU6-429P-201ENST00000384582 108 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 MIR652-201ENST00000385278 98 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 RNU6-780P-201ENST00000391030 104 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 SCARNA18B-201ENST00000458806 135 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 RNA5SP470-201ENST00000516463 106 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 SNORD67.1-201ENST00000516618 108 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 MIR378F-201ENST00000578143 78 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.42□□□□□ -2.64
SDC4P31431 RNU7-10P-201ENST00000607194 63 ntBASIC-1.42□□□□□ -2.64
SDC4P31431 SNORD115-25-201ENST00000362619 82 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 RNU4-16P-201ENST00000364737 141 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 RNU6-524P-201ENST00000384270 107 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 SNORA69.1-201ENST00000390904 137 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 RNU6-120P-201ENST00000516077 103 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.43□□□□□ -2.64
SDC4P31431 TPTEP1-208ENST00000636884 213 ntBASIC-1.43□□□□□ -2.64
SDC4P31431 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 MIR617-201ENST00000385030 97 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.44□□□□□ -2.64
SDC4P31431 AL365203.2-201ENST00000423444 196 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 SEPT14P3-201ENST00000439401 183 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 AL732372.2-207ENST00000445840 183 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 SEPT14P2-201ENST00000453405 183 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 SEPT14P4-201ENST00000513445 186 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 FO082796.1-201ENST00000523795 183 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 RN7SKP299-201ENST00000606679 301 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 AC098479.1-201ENST00000609225 154 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 MIR6863-201ENST00000636112 90 ntBASIC-1.44□□□□□ -2.64
SDC4P31431 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 SNORA32-201ENST00000384072 121 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 RNU6-908P-201ENST00000410160 94 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 RNU7-80P-201ENST00000459562 61 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 AP003733.2-201ENST00000529409 171 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.45□□□□□ -2.64
SDC4P31431 MIR4500-201ENST00000579472 76 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 AC006504.6-201ENST00000590142 199 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 AC090617.10-201ENST00000624308 134 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 MIR382-201ENST00000637119 76 ntBASIC-1.45□□□□□ -2.64
SDC4P31431 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU6-899P-201ENST00000363947 107 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU6-973P-201ENST00000364690 107 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNY4P3-201ENST00000365254 95 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU6-905P-201ENST00000384434 107 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU4-70P-201ENST00000384579 139 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 SNORA53-201ENST00000391141 249 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 AC244090.1-201ENST00000441884 93 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU7-169P-201ENST00000459456 61 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 MTCO2P24-201ENST00000515611 426 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 AC024909.2-201ENST00000553035 286 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 AL512360.1-201ENST00000555346 234 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 MIR4790-201ENST00000577799 79 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
SDC4P31431 U6.92-201ENST00000636464 89 ntBASIC-1.46□□□□□ -2.64
SDC4P31431 RNU6-451P-201ENST00000362921 107 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 RNU6-144P-201ENST00000383951 107 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 SNORA51.5-201ENST00000384126 131 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 RNU6-476P-201ENST00000384726 107 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 MT-TY-201ENST00000387409 66 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
SDC4P31431 RNU6-763P-201ENST00000390865 106 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms