Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC245047.7-201ENST00000440265 293 ntBASIC1.75□□□□□ -2.13
SDHAP31040 RPL30P7-201ENST00000479312 323 ntBASIC1.75□□□□□ -2.13
SDHAP31040 RPS23P4-201ENST00000487908 423 ntBASIC1.75□□□□□ -2.13
SDHAP31040 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
SDHAP31040 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.75□□□□□ -2.13
SDHAP31040 SNORD38B-202ENST00000625943 69 ntBASIC1.75□□□□□ -2.13
SDHAP31040 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.75□□□□□ -2.13
SDHAP31040 AL589743.1-201ENST00000551932 2712 ntBASIC1.75□□□□□ -2.13
SDHAP31040 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SDHAP31040 U8.2-201ENST00000363156 134 ntBASIC1.74□□□□□ -2.13
SDHAP31040 SNORA63.5-201ENST00000363548 123 ntBASIC1.74□□□□□ -2.13
SDHAP31040 SNORD12C-201ENST00000386307 89 ntBASIC1.74□□□□□ -2.13
SDHAP31040 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.74□□□□□ -2.13
SDHAP31040 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
SDHAP31040 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDHAP31040 SNORA63.4-201ENST00000362763 126 ntBASIC1.73□□□□□ -2.13
SDHAP31040 Y_RNA.470-201ENST00000384307 117 ntBASIC1.73□□□□□ -2.13
SDHAP31040 MIR548D2-201ENST00000384955 97 ntBASIC1.73□□□□□ -2.13
SDHAP31040 RNU4-69P-201ENST00000410677 143 ntBASIC1.73□□□□□ -2.13
SDHAP31040 RNU6-602P-201ENST00000411155 105 ntBASIC1.73□□□□□ -2.13
SDHAP31040 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.73□□□□□ -2.13
SDHAP31040 AC063976.4-201ENST00000421971 163 ntBASIC1.73□□□□□ -2.13
SDHAP31040 AC027119.1-201ENST00000440877 241 ntBASIC1.73□□□□□ -2.13
SDHAP31040 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
SDHAP31040 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDHAP31040 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SDHAP31040 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
SDHAP31040 Y_RNA.362-201ENST00000365518 110 ntBASIC1.72□□□□□ -2.13
SDHAP31040 SNORA32-201ENST00000384072 121 ntBASIC1.72□□□□□ -2.13
SDHAP31040 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
SDHAP31040 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
SDHAP31040 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.72□□□□□ -2.13
SDHAP31040 MIR4422-201ENST00000581938 83 ntBASIC1.72□□□□□ -2.13
SDHAP31040 MIR548AE2-201ENST00000583456 67 ntBASIC1.72□□□□□ -2.13
SDHAP31040 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SDHAP31040 AL035470.1-201ENST00000622571 220 ntBASIC1.72□□□□□ -2.13
SDHAP31040 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
SDHAP31040 SNORD115-2-201ENST00000362842 82 ntBASIC1.71□□□□□ -2.14
SDHAP31040 SNORD115-20-201ENST00000365099 82 ntBASIC1.71□□□□□ -2.14
SDHAP31040 SNORD77B-201ENST00000391112 67 ntBASIC1.71□□□□□ -2.14
SDHAP31040 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
SDHAP31040 AC090844.1-201ENST00000422019 156 ntBASIC1.71□□□□□ -2.14
SDHAP31040 PDCD5P2-201ENST00000507570 312 ntBASIC1.71□□□□□ -2.14
SDHAP31040 MIR4679-2-201ENST00000578358 77 ntBASIC1.71□□□□□ -2.14
SDHAP31040 MIR3664-201ENST00000579074 99 ntBASIC1.71□□□□□ -2.14
SDHAP31040 MIR8065-201ENST00000620577 100 ntBASIC1.71□□□□□ -2.14
SDHAP31040 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDHAP31040 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDHAP31040 Y_RNA.49-201ENST00000362714 112 ntBASIC1.7□□□□□ -2.14
SDHAP31040 Y_RNA.281-201ENST00000364774 94 ntBASIC1.7□□□□□ -2.14
SDHAP31040 RNU6-396P-201ENST00000365369 105 ntBASIC1.7□□□□□ -2.14
SDHAP31040 RNU1-78P-201ENST00000391248 165 ntBASIC1.7□□□□□ -2.14
SDHAP31040 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SDHAP31040 AL133373.1-201ENST00000497098 94 ntBASIC1.7□□□□□ -2.14
SDHAP31040 AL512310.8-201ENST00000550183 120 ntBASIC1.7□□□□□ -2.14
SDHAP31040 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
SDHAP31040 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.7□□□□□ -2.14
SDHAP31040 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.7□□□□□ -2.14
SDHAP31040 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDHAP31040 MIR103A2-201ENST00000362154 78 ntBASIC1.69□□□□□ -2.14
SDHAP31040 RNA5SP432-201ENST00000362480 116 ntBASIC1.69□□□□□ -2.14
SDHAP31040 Y_RNA.85-201ENST00000363014 111 ntBASIC1.69□□□□□ -2.14
SDHAP31040 RNU6-1107P-201ENST00000364817 104 ntBASIC1.69□□□□□ -2.14
SDHAP31040 SNORA18-201ENST00000384416 132 ntBASIC1.69□□□□□ -2.14
SDHAP31040 RNU6-1237P-201ENST00000384777 107 ntBASIC1.69□□□□□ -2.14
SDHAP31040 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
SDHAP31040 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SDHAP31040 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
SDHAP31040 snoU13.26-201ENST00000459452 105 ntBASIC1.69□□□□□ -2.14
SDHAP31040 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SDHAP31040 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SDHAP31040 Y_RNA.344-201ENST00000365381 112 ntBASIC1.68□□□□□ -2.14
SDHAP31040 RNU6-342P-201ENST00000384521 104 ntBASIC1.68□□□□□ -2.14
SDHAP31040 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
SDHAP31040 RNA5SP237-201ENST00000410414 113 ntBASIC1.68□□□□□ -2.14
SDHAP31040 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.68□□□□□ -2.14
SDHAP31040 RPS27P16-201ENST00000425758 201 ntBASIC1.68□□□□□ -2.14
SDHAP31040 RNA5SP445-201ENST00000515889 115 ntBASIC1.68□□□□□ -2.14
SDHAP31040 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
SDHAP31040 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
SDHAP31040 PRELID3BP2-201ENST00000605362 201 ntBASIC1.68□□□□□ -2.14
SDHAP31040 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
SDHAP31040 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
SDHAP31040 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
SDHAP31040 MIR7843-201ENST00000622274 79 ntBASIC1.68□□□□□ -2.14
SDHAP31040 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
SDHAP31040 Y_RNA.309-201ENST00000365046 111 ntBASIC1.67□□□□□ -2.14
SDHAP31040 RPL39P25-201ENST00000449384 154 ntBASIC1.67□□□□□ -2.14
SDHAP31040 RPL39P34-201ENST00000477141 156 ntBASIC1.67□□□□□ -2.14
SDHAP31040 RNU1-41P-201ENST00000516161 162 ntBASIC1.67□□□□□ -2.14
SDHAP31040 RNU1-48P-201ENST00000516400 162 ntBASIC1.67□□□□□ -2.14
SDHAP31040 AP000942.3-201ENST00000603702 160 ntBASIC1.67□□□□□ -2.14
SDHAP31040 AP000753.3-201ENST00000604083 169 ntBASIC1.67□□□□□ -2.14
SDHAP31040 AC087741.2-201ENST00000619415 172 ntBASIC1.67□□□□□ -2.14
SDHAP31040 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SDHAP31040 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.67□□□□□ -2.14
SDHAP31040 RNA5SP264-201ENST00000363115 107 ntBASIC1.66□□□□□ -2.14
SDHAP31040 Y_RNA.116-201ENST00000363292 103 ntBASIC1.66□□□□□ -2.14
SDHAP31040 AC245517.4-201ENST00000448601 281 ntBASIC1.66□□□□□ -2.14
SDHAP31040 snoU13.25-201ENST00000458945 104 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms