Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RXRBP28702 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
RXRBP28702 Y_RNA.190-201ENST00000363964 101 ntBASIC2.67□□□□□ -1.98
RXRBP28702 MIR29C-201ENST00000385231 88 ntBASIC2.67□□□□□ -1.98
RXRBP28702 AL512598.1-201ENST00000610158 273 ntBASIC2.67□□□□□ -1.98
RXRBP28702 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
RXRBP28702 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RXRBP28702 RNU6-23P-201ENST00000363283 107 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNY1P1-201ENST00000364372 112 ntBASIC2.66□□□□□ -1.98
RXRBP28702 Y_RNA.377-201ENST00000365644 108 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-1201P-201ENST00000384227 107 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-616P-201ENST00000384353 107 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-1319P-201ENST00000390855 104 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-747P-201ENST00000390928 104 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-241P-201ENST00000391148 104 ntBASIC2.66□□□□□ -1.98
RXRBP28702 SNORA26.6-201ENST00000391256 115 ntBASIC2.66□□□□□ -1.98
RXRBP28702 U8.16-201ENST00000391279 133 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNU6-177P-201ENST00000411257 104 ntBASIC2.66□□□□□ -1.98
RXRBP28702 AC069257.2-201ENST00000441819 155 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RPL39P39-201ENST00000455840 151 ntBASIC2.66□□□□□ -1.98
RXRBP28702 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
RXRBP28702 RNA5SP137-201ENST00000516833 135 ntBASIC2.66□□□□□ -1.98
RXRBP28702 MIR3202-2-201ENST00000635980 79 ntBASIC2.66□□□□□ -1.98
RXRBP28702 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RXRBP28702 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RXRBP28702 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RXRBP28702 Y_RNA.299-201ENST00000364973 94 ntBASIC2.65□□□□□ -1.99
RXRBP28702 SNORD115-35-201ENST00000365122 82 ntBASIC2.65□□□□□ -1.99
RXRBP28702 RNU6-1276P-201ENST00000365372 104 ntBASIC2.65□□□□□ -1.99
RXRBP28702 RNU6-424P-201ENST00000384367 105 ntBASIC2.65□□□□□ -1.99
RXRBP28702 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RXRBP28702 SNORA7.5-201ENST00000410672 110 ntBASIC2.65□□□□□ -1.99
RXRBP28702 AC004965.1-201ENST00000413033 213 ntBASIC2.65□□□□□ -1.99
RXRBP28702 MIR548AE2-201ENST00000583456 67 ntBASIC2.65□□□□□ -1.99
RXRBP28702 AC022202.1-201ENST00000613515 211 ntBASIC2.65□□□□□ -1.99
RXRBP28702 RNU6-833P-201ENST00000363486 107 ntBASIC2.64□□□□□ -1.99
RXRBP28702 RNU6-219P-201ENST00000364728 107 ntBASIC2.64□□□□□ -1.99
RXRBP28702 RNU6-497P-201ENST00000365316 104 ntBASIC2.64□□□□□ -1.99
RXRBP28702 RNU6-979P-201ENST00000383896 107 ntBASIC2.64□□□□□ -1.99
RXRBP28702 Y_RNA.467-201ENST00000384297 102 ntBASIC2.64□□□□□ -1.99
RXRBP28702 MIR1267-201ENST00000408723 78 ntBASIC2.64□□□□□ -1.99
RXRBP28702 RNU7-113P-201ENST00000459273 62 ntBASIC2.64□□□□□ -1.99
RXRBP28702 RNU6-267P-201ENST00000516714 103 ntBASIC2.64□□□□□ -1.99
RXRBP28702 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
RXRBP28702 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RXRBP28702 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RXRBP28702 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RXRBP28702 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.63□□□□□ -1.99
RXRBP28702 Y_RNA.95-201ENST00000363079 95 ntBASIC2.63□□□□□ -1.99
RXRBP28702 RNU6-813P-201ENST00000384691 107 ntBASIC2.63□□□□□ -1.99
RXRBP28702 RNU6-402P-201ENST00000410678 103 ntBASIC2.63□□□□□ -1.99
RXRBP28702 MRPL35P3-201ENST00000421557 364 ntBASIC2.63□□□□□ -1.99
RXRBP28702 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
RXRBP28702 RNU6-1018P-201ENST00000516577 106 ntBASIC2.63□□□□□ -1.99
RXRBP28702 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
RXRBP28702 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.63□□□□□ -1.99
RXRBP28702 SNORA28-201ENST00000606769 126 ntBASIC2.63□□□□□ -1.99
RXRBP28702 MIR8081-201ENST00000611533 95 ntBASIC2.63□□□□□ -1.99
RXRBP28702 MIR6895-201ENST00000613497 78 ntBASIC2.63□□□□□ -1.99
RXRBP28702 IGLL4P-201ENST00000614590 133 ntBASIC2.63□□□□□ -1.99
RXRBP28702 AC084768.2-201ENST00000622736 221 ntBASIC2.63□□□□□ -1.99
RXRBP28702 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RXRBP28702 RNU6-1019P-201ENST00000364424 107 ntBASIC2.62□□□□□ -1.99
RXRBP28702 SNORA24-201ENST00000384096 131 ntBASIC2.62□□□□□ -1.99
RXRBP28702 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.62□□□□□ -1.99
RXRBP28702 RNU6-1190P-201ENST00000410811 104 ntBASIC2.62□□□□□ -1.99
RXRBP28702 AC003989.2-201ENST00000440224 169 ntBASIC2.62□□□□□ -1.99
RXRBP28702 RNA5SP168-201ENST00000516642 112 ntBASIC2.62□□□□□ -1.99
RXRBP28702 AC005786.1-201ENST00000588553 154 ntBASIC2.62□□□□□ -1.99
RXRBP28702 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.62□□□□□ -1.99
RXRBP28702 AC245060.5-201ENST00000610778 3293 ntBASIC2.61□□□□□ -1.99
RXRBP28702 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.61□□□□□ -1.99
RXRBP28702 SNORA22.1-201ENST00000362701 134 ntBASIC2.61□□□□□ -1.99
RXRBP28702 SNORA18-201ENST00000384416 132 ntBASIC2.61□□□□□ -1.99
RXRBP28702 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
RXRBP28702 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.61□□□□□ -1.99
RXRBP28702 RNU6-521P-201ENST00000516663 105 ntBASIC2.61□□□□□ -1.99
RXRBP28702 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RXRBP28702 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.61□□□□□ -1.99
RXRBP28702 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRBP28702 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRBP28702 RNU1-58P-201ENST00000362413 163 ntBASIC2.6□□□□□ -1.99
RXRBP28702 Y_RNA.36-201ENST00000362602 112 ntBASIC2.6□□□□□ -1.99
RXRBP28702 SNORD45B-201ENST00000364617 72 ntBASIC2.6□□□□□ -1.99
RXRBP28702 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
RXRBP28702 MIR5588-201ENST00000581890 63 ntBASIC2.6□□□□□ -1.99
RXRBP28702 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRBP28702 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RXRBP28702 RNU6-1313P-201ENST00000362622 102 ntBASIC2.59□□□□□ -1.99
RXRBP28702 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
RXRBP28702 MIR516B2-201ENST00000385190 85 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNU6-913P-201ENST00000390913 95 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNU2-40P-201ENST00000410833 196 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNA5SP33-201ENST00000516687 98 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNA5SP102-201ENST00000516865 106 ntBASIC2.59□□□□□ -1.99
RXRBP28702 RNU6-250P-201ENST00000516958 103 ntBASIC2.59□□□□□ -1.99
RXRBP28702 MIR4666B-201ENST00000578142 81 ntBASIC2.59□□□□□ -1.99
RXRBP28702 AC069114.2-201ENST00000604699 304 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 259.7 ms