Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
RPA1P27694 Y_RNA.116-201ENST00000363292 103 ntBASIC0.65□□□□□ -2.31
RPA1P27694 SNORD113.3-201ENST00000364630 78 ntBASIC0.65□□□□□ -2.31
RPA1P27694 RNU6-818P-201ENST00000364837 108 ntBASIC0.65□□□□□ -2.31
RPA1P27694 SNORA1.2-201ENST00000365189 134 ntBASIC0.65□□□□□ -2.31
RPA1P27694 RNU6-728P-201ENST00000365375 104 ntBASIC0.65□□□□□ -2.31
RPA1P27694 RNY1P8-201ENST00000383970 114 ntBASIC0.65□□□□□ -2.31
RPA1P27694 RNU4-43P-201ENST00000410628 137 ntBASIC0.65□□□□□ -2.31
RPA1P27694 SEPT7P4-201ENST00000437076 306 ntBASIC0.65□□□□□ -2.31
RPA1P27694 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
RPA1P27694 AC087499.4-201ENST00000448505 178 ntBASIC0.65□□□□□ -2.31
RPA1P27694 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.65□□□□□ -2.31
RPA1P27694 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
RPA1P27694 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPA1P27694 Y_RNA.168-201ENST00000363740 102 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU6-1082P-201ENST00000364574 107 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU6-396P-201ENST00000365369 105 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
RPA1P27694 snoU13.16-201ENST00000459350 104 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU6-1258P-201ENST00000516911 111 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU6-388P-201ENST00000517012 105 ntBASIC0.64□□□□□ -2.31
RPA1P27694 RNU6-389P-201ENST00000517048 105 ntBASIC0.64□□□□□ -2.31
RPA1P27694 MIR5197-201ENST00000583721 112 ntBASIC0.64□□□□□ -2.31
RPA1P27694 SNORA4-201ENST00000584302 138 ntBASIC0.64□□□□□ -2.31
RPA1P27694 AC009779.6-201ENST00000603972 165 ntBASIC0.64□□□□□ -2.31
RPA1P27694 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
RPA1P27694 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
RPA1P27694 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.63□□□□□ -2.31
RPA1P27694 Y_RNA.242-201ENST00000364473 110 ntBASIC0.63□□□□□ -2.31
RPA1P27694 Y_RNA.351-201ENST00000365436 96 ntBASIC0.63□□□□□ -2.31
RPA1P27694 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RPA1P27694 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
RPA1P27694 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
RPA1P27694 RNU5E-9P-201ENST00000411164 104 ntBASIC0.63□□□□□ -2.31
RPA1P27694 Y_RNA.797-201ENST00000515977 94 ntBASIC0.63□□□□□ -2.31
RPA1P27694 RNU4-71P-201ENST00000516258 113 ntBASIC0.63□□□□□ -2.31
RPA1P27694 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
RPA1P27694 AL365205.2-201ENST00000594586 68 ntBASIC0.63□□□□□ -2.31
RPA1P27694 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
RPA1P27694 Y_RNA.200-201ENST00000364018 102 ntBASIC0.62□□□□□ -2.31
RPA1P27694 SNORA1.1-201ENST00000364671 133 ntBASIC0.62□□□□□ -2.31
RPA1P27694 RNU6-643P-201ENST00000384018 107 ntBASIC0.62□□□□□ -2.31
RPA1P27694 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
RPA1P27694 MIR548I3-201ENST00000408378 149 ntBASIC0.62□□□□□ -2.31
RPA1P27694 RNA5SP220-201ENST00000516298 104 ntBASIC0.62□□□□□ -2.31
RPA1P27694 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
RPA1P27694 MIR2115-201ENST00000516657 100 ntBASIC0.62□□□□□ -2.31
RPA1P27694 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.62□□□□□ -2.31
RPA1P27694 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
RPA1P27694 MIR378D2-201ENST00000580636 98 ntBASIC0.62□□□□□ -2.31
RPA1P27694 AC091932.4-201ENST00000623386 200 ntBASIC0.62□□□□□ -2.31
RPA1P27694 RNU6-103P-201ENST00000363686 107 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU6-275P-201ENST00000364910 107 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU4-70P-201ENST00000384579 139 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU6-768P-201ENST00000384683 107 ntBASIC0.61□□□□□ -2.31
RPA1P27694 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.61□□□□□ -2.31
RPA1P27694 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU6-994P-201ENST00000410507 111 ntBASIC0.61□□□□□ -2.31
RPA1P27694 AC074198.2-201ENST00000508153 258 ntBASIC0.61□□□□□ -2.31
RPA1P27694 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.61□□□□□ -2.31
RPA1P27694 RNU6-1149P-201ENST00000516810 97 ntBASIC0.61□□□□□ -2.31
RPA1P27694 RNU6-1271P-201ENST00000517049 105 ntBASIC0.61□□□□□ -2.31
RPA1P27694 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.61□□□□□ -2.31
RPA1P27694 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
RPA1P27694 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
RPA1P27694 MIR6717-201ENST00000622747 73 ntBASIC0.61□□□□□ -2.31
RPA1P27694 MIR3658-201ENST00000636291 56 ntBASIC0.61□□□□□ -2.31
RPA1P27694 Y_RNA.83-201ENST00000363005 113 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU4-16P-201ENST00000364737 141 ntBASIC0.6□□□□□ -2.31
RPA1P27694 Y_RNA.410-201ENST00000383992 113 ntBASIC0.6□□□□□ -2.31
RPA1P27694 Y_RNA.478-201ENST00000384358 107 ntBASIC0.6□□□□□ -2.31
RPA1P27694 MIR588-201ENST00000384900 83 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
RPA1P27694 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
RPA1P27694 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU7-62P-201ENST00000458856 62 ntBASIC0.6□□□□□ -2.31
RPA1P27694 AC107297.1-201ENST00000459991 176 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RNU2-60P-201ENST00000517290 128 ntBASIC0.6□□□□□ -2.31
RPA1P27694 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
RPA1P27694 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
RPA1P27694 RMST_2.1-201ENST00000617263 136 ntBASIC0.6□□□□□ -2.31
RPA1P27694 AL596211.1-201ENST00000569873 2277 ntBASIC0.6□□□□□ -2.31
RPA1P27694 MIR30D-201ENST00000362283 70 ntBASIC0.59□□□□□ -2.31
RPA1P27694 Y_RNA.75-201ENST00000362927 97 ntBASIC0.59□□□□□ -2.31
RPA1P27694 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
RPA1P27694 Y_RNA.354-201ENST00000365448 111 ntBASIC0.59□□□□□ -2.31
RPA1P27694 MIR563-201ENST00000385080 79 ntBASIC0.59□□□□□ -2.31
RPA1P27694 MIR518E-201ENST00000385252 88 ntBASIC0.59□□□□□ -2.31
RPA1P27694 MT-TN-201ENST00000387400 73 ntBASIC0.59□□□□□ -2.31
RPA1P27694 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RPA1P27694 snosnR66.1-201ENST00000391095 99 ntBASIC0.59□□□□□ -2.31
RPA1P27694 AC096949.1-201ENST00000412047 152 ntBASIC0.59□□□□□ -2.31
RPA1P27694 RNU7-96P-201ENST00000459535 64 ntBASIC0.59□□□□□ -2.31
RPA1P27694 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
RPA1P27694 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.59□□□□□ -2.31
RPA1P27694 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms