Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RNU6-1258P-201ENST00000516911 111 ntBASIC1.79□□□□□ -2.12
NR4A1P22736 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
NR4A1P22736 DEFB131E-201ENST00000532329 154 ntBASIC1.79□□□□□ -2.12
NR4A1P22736 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.79□□□□□ -2.12
NR4A1P22736 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.78□□□□□ -2.12
NR4A1P22736 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NR4A1P22736 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NR4A1P22736 RNU4-67P-201ENST00000364569 141 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 RNU6-409P-201ENST00000384114 104 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 RNU6-913P-201ENST00000390913 95 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 MIR1302-4-201ENST00000408701 150 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 SNORA19.1-201ENST00000410656 129 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 RPS3AP1-201ENST00000413190 320 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NR4A1P22736 MIR4694-201ENST00000578534 80 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
NR4A1P22736 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 RNY3P2-201ENST00000362918 102 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 Y_RNA.155-201ENST00000363632 101 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 Y_RNA.601-201ENST00000410500 113 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 RNU6-733P-201ENST00000410759 104 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 MTATP8P2-201ENST00000435212 202 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 Y_RNA.773-201ENST00000607168 90 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 MIR8055-201ENST00000610739 97 ntBASIC1.77□□□□□ -2.13
NR4A1P22736 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
NR4A1P22736 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 RNU6-1099P-201ENST00000363533 107 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 SNORA1.1-201ENST00000364671 133 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 Y_RNA.354-201ENST00000365448 111 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 Y_RNA.470-201ENST00000384307 117 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 MIR194-1-201ENST00000384892 85 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 AC055731.1-201ENST00000474387 401 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 RNU6-322P-201ENST00000516010 103 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 SCARNA23-201ENST00000516060 130 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 RNU6-109P-201ENST00000516364 107 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 RNU6-184P-201ENST00000516514 107 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 MIR4764-201ENST00000580680 88 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 MIR548AE2-201ENST00000583456 67 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 AC008133.2-201ENST00000624540 351 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 MIR1255B1-201ENST00000636325 63 ntBASIC1.76□□□□□ -2.13
NR4A1P22736 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NR4A1P22736 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
NR4A1P22736 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NR4A1P22736 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 Y_RNA.107-201ENST00000363190 121 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 Y_RNA.220-201ENST00000364244 109 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-294P-201ENST00000364999 102 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 MIR653-201ENST00000385279 96 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-1190P-201ENST00000410811 104 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 AC004965.1-201ENST00000413033 213 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 snoU13.15-201ENST00000459407 104 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-917P-201ENST00000516294 104 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-1018P-201ENST00000516577 106 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 AL513534.2-201ENST00000603836 250 ntBASIC1.75□□□□□ -2.13
NR4A1P22736 RNU6-1131P-201ENST00000364955 107 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 Y_RNA.360-201ENST00000365512 102 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 Y_RNA.466-201ENST00000384294 113 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 Y_RNA.558-201ENST00000384685 113 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 MIR520C-201ENST00000385005 87 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 snoU13.26-201ENST00000459452 105 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 Z97988.1-201ENST00000637697 135 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
NR4A1P22736 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NR4A1P22736 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NR4A1P22736 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
NR4A1P22736 RNU6-832P-201ENST00000363319 107 ntBASIC1.73□□□□□ -2.13
NR4A1P22736 MIR577-201ENST00000385196 96 ntBASIC1.73□□□□□ -2.13
NR4A1P22736 AL161935.2-201ENST00000414627 60 ntBASIC1.73□□□□□ -2.13
NR4A1P22736 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
NR4A1P22736 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
NR4A1P22736 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 Y_RNA.377-201ENST00000365644 108 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 RNU6-616P-201ENST00000384353 107 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 AL451046.2-201ENST00000403074 277 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 AC096949.1-201ENST00000412047 152 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 JTBP1-201ENST00000441314 247 ntBASIC1.72□□□□□ -2.13
NR4A1P22736 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
NR4A1P22736 MIR488-201ENST00000365739 83 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 RNU6-49P-201ENST00000384256 107 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 HMGN1P33-201ENST00000432945 451 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 MIR1270-201ENST00000459320 83 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.71□□□□□ -2.14
NR4A1P22736 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NR4A1P22736 MALAT1.1-201ENST00000618249 95 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 MIR8065-201ENST00000620577 100 ntBASIC1.71□□□□□ -2.14
NR4A1P22736 Y_RNA.96-201ENST00000363092 109 ntBASIC1.7□□□□□ -2.14
NR4A1P22736 MIR605-201ENST00000385078 83 ntBASIC1.7□□□□□ -2.14
NR4A1P22736 RNU6-679P-201ENST00000391003 106 ntBASIC1.7□□□□□ -2.14
NR4A1P22736 SNORA7.5-201ENST00000410672 110 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms