Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CPDP1-201ENST00000579660 283 ntBASIC-2.71□□□□□ -2.84
HMGA1P17096 MIR4464-201ENST00000580818 92 ntBASIC-2.71□□□□□ -2.84
HMGA1P17096 RN7SKP299-201ENST00000606679 301 ntBASIC-2.71□□□□□ -2.84
HMGA1P17096 AC006566.1-201ENST00000608943 513 ntBASIC-2.71□□□□□ -2.84
HMGA1P17096 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 RNU6-695P-201ENST00000391157 104 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 MIR548E-201ENST00000408287 88 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 RNU7-79P-201ENST00000516082 62 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 RNU6-762P-201ENST00000517107 102 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 MIR466-201ENST00000580653 84 ntBASIC-2.72□□□□□ -2.84
HMGA1P17096 RNU6-230P-201ENST00000362457 104 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 MTND3P23-201ENST00000431980 347 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 MTATP6P13-201ENST00000438531 667 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-2.73□□□□□ -2.85
HMGA1P17096 USP9YP23-201ENST00000455085 407 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 SEPT14P4-201ENST00000513445 186 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 RNU6-397P-201ENST00000516226 104 ntBASIC-2.73□□□□□ -2.85
HMGA1P17096 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.73□□□□□ -2.85
HMGA1P17096 RNU6-79P-201ENST00000362511 107 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 SNORD115-22-201ENST00000364456 82 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 RNU2-61P-201ENST00000411069 191 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 AC104850.1-201ENST00000435940 476 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 MIR6773-201ENST00000612812 74 ntBASIC-2.74□□□□□ -2.85
HMGA1P17096 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 RNU6-413P-201ENST00000384115 107 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 RNU4-70P-201ENST00000384579 139 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 MIR1-2-201ENST00000384961 85 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 AC104010.1-201ENST00000616889 150 ntBASIC-2.75□□□□□ -2.85
HMGA1P17096 RNY1P16-201ENST00000363063 111 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 RNU6-1310P-201ENST00000384153 107 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 AC090616.4-201ENST00000448026 115 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 SNORD11-201ENST00000459124 84 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 AL133173.2-201ENST00000614270 90 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.76□□□□□ -2.85
HMGA1P17096 RNU6-318P-201ENST00000384283 103 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 RNU6-790P-201ENST00000384479 105 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 AC018880.2-201ENST00000414265 201 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 MIR3123-201ENST00000583417 75 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 AC098479.1-201ENST00000609225 154 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 AC016911.1-201ENST00000613297 452 ntBASIC-2.77□□□□□ -2.85
HMGA1P17096 SNORA22.1-201ENST00000362701 134 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 RNU6-74P-201ENST00000384235 107 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 RNU6-429P-201ENST00000384582 108 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 Z84480.1-201ENST00000605131 311 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 AL008718.3-201ENST00000610217 321 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.78□□□□□ -2.85
HMGA1P17096 RNU6-208P-201ENST00000362431 107 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 Y_RNA.472-201ENST00000384322 102 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 SNORD63B-201ENST00000411005 70 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 CYCSP46-201ENST00000423569 204 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 MTND3P7-201ENST00000474435 343 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 SNORD27.1-201ENST00000516319 72 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 MIR4748-201ENST00000578076 82 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 AC004467.1-201ENST00000615678 330 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.79□□□□□ -2.86
HMGA1P17096 Y_RNA.135-201ENST00000363439 95 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 SNORA20-201ENST00000384662 132 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.8□□□□□ -2.86
HMGA1P17096 RNU6-693P-201ENST00000516134 107 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 Y_RNA.672-201ENST00000516289 104 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 RNU6-850P-201ENST00000516934 103 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.8□□□□□ -2.86
HMGA1P17096 MIR4500-201ENST00000579472 76 ntBASIC-2.8□□□□□ -2.86
HMGA1P17096 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 RNU6-1145P-201ENST00000384246 107 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.561-201ENST00000384694 100 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.608-201ENST00000410647 95 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 SNORA40.9-201ENST00000515895 93 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 RNU7-115P-201ENST00000516433 55 ntBASIC-2.81□□□□□ -2.86
HMGA1P17096 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 MIR519A1-201ENST00000385257 85 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 MTCO2P30-201ENST00000503662 364 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 RNU7-175P-201ENST00000515915 61 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 AC133104.2-201ENST00000615272 193 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 MIR6888-201ENST00000621977 67 ntBASIC-2.82□□□□□ -2.86
HMGA1P17096 RNU6-879P-201ENST00000364328 108 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.83□□□□□ -2.86
HMGA1P17096 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.83□□□□□ -2.86
HMGA1P17096 GPR143P-201ENST00000434155 205 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 AC009961.2-201ENST00000435771 251 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 AL353691.2-201ENST00000443795 59 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 RNU7-149P-201ENST00000516739 59 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 AP003357.1-201ENST00000604497 148 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms