Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.537-201ENST00000384626 109 ntBASIC2.58□□□□□ -2
HOXD8P13378 RNU6-887P-201ENST00000410660 100 ntBASIC2.58□□□□□ -2
HOXD8P13378 AC073261.1-201ENST00000429409 121 ntBASIC2.58□□□□□ -2
HOXD8P13378 snoU13.16-201ENST00000459350 104 ntBASIC2.58□□□□□ -2
HOXD8P13378 AC108729.3-201ENST00000513484 108 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR4666B-201ENST00000578142 81 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR4777-201ENST00000583710 86 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
HOXD8P13378 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
HOXD8P13378 U1.36-201ENST00000620684 176 ntBASIC2.58□□□□□ -2
HOXD8P13378 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXD8P13378 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HOXD8P13378 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HOXD8P13378 Y_RNA.467-201ENST00000384297 102 ntBASIC2.57□□□□□ -2
HOXD8P13378 RNU6-24P-201ENST00000384440 107 ntBASIC2.57□□□□□ -2
HOXD8P13378 RNU6-972P-201ENST00000391208 107 ntBASIC2.57□□□□□ -2
HOXD8P13378 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXD8P13378 HMGN2P23-201ENST00000456759 269 ntBASIC2.57□□□□□ -2
HOXD8P13378 MIR4662A-201ENST00000637499 67 ntBASIC2.57□□□□□ -2
HOXD8P13378 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HOXD8P13378 MIR424-201ENST00000362227 98 ntBASIC2.56□□□□□ -2
HOXD8P13378 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
HOXD8P13378 Y_RNA.354-201ENST00000365448 111 ntBASIC2.56□□□□□ -2
HOXD8P13378 RNU6-296P-201ENST00000384608 107 ntBASIC2.56□□□□□ -2
HOXD8P13378 RNU7-171P-201ENST00000459581 62 ntBASIC2.56□□□□□ -2
HOXD8P13378 RNU7-2P-201ENST00000516096 62 ntBASIC2.56□□□□□ -2
HOXD8P13378 MIR4439-201ENST00000583746 80 ntBASIC2.56□□□□□ -2
HOXD8P13378 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.56□□□□□ -2
HOXD8P13378 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
HOXD8P13378 RNU6-1313P-201ENST00000362622 102 ntBASIC2.55□□□□□ -2
HOXD8P13378 RNU6-457P-201ENST00000363999 107 ntBASIC2.55□□□□□ -2
HOXD8P13378 Y_RNA.221-201ENST00000364248 96 ntBASIC2.55□□□□□ -2
HOXD8P13378 RNU6-497P-201ENST00000365316 104 ntBASIC2.55□□□□□ -2
HOXD8P13378 RNU6-979P-201ENST00000383896 107 ntBASIC2.55□□□□□ -2
HOXD8P13378 Y_RNA.426-201ENST00000384068 113 ntBASIC2.55□□□□□ -2
HOXD8P13378 AL023284.1-201ENST00000403956 276 ntBASIC2.55□□□□□ -2
HOXD8P13378 MIR1270-201ENST00000459320 83 ntBASIC2.55□□□□□ -2
HOXD8P13378 AC099513.1-201ENST00000490423 301 ntBASIC2.55□□□□□ -2
HOXD8P13378 SNORA74.3-201ENST00000517108 154 ntBASIC2.55□□□□□ -2
HOXD8P13378 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.55□□□□□ -2
HOXD8P13378 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.55□□□□□ -2
HOXD8P13378 MIR376B-201ENST00000614515 100 ntBASIC2.55□□□□□ -2
HOXD8P13378 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.55□□□□□ -2
HOXD8P13378 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXD8P13378 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXD8P13378 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
HOXD8P13378 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
HOXD8P13378 RPS29P28-201ENST00000446439 141 ntBASIC2.54□□□□□ -2
HOXD8P13378 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
HOXD8P13378 CYP3A52P-201ENST00000563326 91 ntBASIC2.54□□□□□ -2
HOXD8P13378 MIR5588-201ENST00000581890 63 ntBASIC2.54□□□□□ -2
HOXD8P13378 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.54□□□□□ -2
HOXD8P13378 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXD8P13378 Y_RNA.73-201ENST00000362910 113 ntBASIC2.53□□□□□ -2
HOXD8P13378 RNU6-865P-201ENST00000364772 107 ntBASIC2.53□□□□□ -2
HOXD8P13378 SNORD115-35-201ENST00000365122 82 ntBASIC2.53□□□□□ -2
HOXD8P13378 Y_RNA.338-201ENST00000365320 114 ntBASIC2.53□□□□□ -2
HOXD8P13378 RNU6-342P-201ENST00000384521 104 ntBASIC2.53□□□□□ -2
HOXD8P13378 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXD8P13378 RNU6-402P-201ENST00000410678 103 ntBASIC2.53□□□□□ -2
HOXD8P13378 RNU6-1086P-201ENST00000410930 100 ntBASIC2.53□□□□□ -2
HOXD8P13378 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.53□□□□□ -2
HOXD8P13378 MIR6766-201ENST00000622641 72 ntBASIC2.53□□□□□ -2
HOXD8P13378 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
HOXD8P13378 AC008133.2-201ENST00000624540 351 ntBASIC2.53□□□□□ -2
HOXD8P13378 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HOXD8P13378 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HOXD8P13378 Y_RNA.190-201ENST00000363964 101 ntBASIC2.52□□□□□ -2.01
HOXD8P13378 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
HOXD8P13378 MIR520C-201ENST00000385005 87 ntBASIC2.52□□□□□ -2.01
HOXD8P13378 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
HOXD8P13378 RNU7-43P-201ENST00000516554 64 ntBASIC2.52□□□□□ -2.01
HOXD8P13378 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXD8P13378 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD8P13378 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD8P13378 SNORD116-10-201ENST00000363791 102 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 MIR206-201ENST00000384872 86 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 RNU2-40P-201ENST00000410833 196 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 RNU6-857P-201ENST00000515893 110 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 SNORD14A-201ENST00000606526 91 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
HOXD8P13378 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HOXD8P13378 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 MIR524-201ENST00000385242 87 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 MIR1287-201ENST00000408492 90 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 RNA5SP200-201ENST00000516360 103 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 MIR4764-201ENST00000580680 88 ntBASIC2.5□□□□□ -2.01
HOXD8P13378 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HOXD8P13378 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXD8P13378 RNU6-787P-201ENST00000384032 107 ntBASIC2.49□□□□□ -2.01
HOXD8P13378 Y_RNA.448-201ENST00000384185 108 ntBASIC2.49□□□□□ -2.01
HOXD8P13378 SNORA64-201ENST00000384674 134 ntBASIC2.49□□□□□ -2.01
HOXD8P13378 U8.15-201ENST00000390947 134 ntBASIC2.49□□□□□ -2.01
HOXD8P13378 AC090844.1-201ENST00000422019 156 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms