Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
APPP05067 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.85□□□□□ -2.11
APPP05067 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
APPP05067 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
APPP05067 RNU6-735P-201ENST00000410612 107 ntBASIC1.85□□□□□ -2.11
APPP05067 RNA5SP247-201ENST00000411181 105 ntBASIC1.85□□□□□ -2.11
APPP05067 POLR2J4-204ENST00000418424 324 ntBASIC1.85□□□□□ -2.11
APPP05067 AL512326.2-201ENST00000426359 151 ntBASIC1.85□□□□□ -2.11
APPP05067 SNORD33.1-201ENST00000516213 88 ntBASIC1.85□□□□□ -2.11
APPP05067 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
APPP05067 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
APPP05067 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
APPP05067 RNU6-1290P-201ENST00000362957 109 ntBASIC1.84□□□□□ -2.11
APPP05067 Y_RNA.291-201ENST00000364886 113 ntBASIC1.84□□□□□ -2.11
APPP05067 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
APPP05067 MIR1323-201ENST00000408090 73 ntBASIC1.84□□□□□ -2.11
APPP05067 AC023790.1-201ENST00000482174 347 ntBASIC1.84□□□□□ -2.11
APPP05067 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.84□□□□□ -2.11
APPP05067 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
APPP05067 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
APPP05067 MIR8055-201ENST00000610739 97 ntBASIC1.84□□□□□ -2.11
APPP05067 MIR6717-201ENST00000622747 73 ntBASIC1.84□□□□□ -2.11
APPP05067 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
APPP05067 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
APPP05067 RNU6-647P-201ENST00000364243 107 ntBASIC1.83□□□□□ -2.12
APPP05067 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
APPP05067 MIR1304-201ENST00000408243 91 ntBASIC1.83□□□□□ -2.12
APPP05067 RNA5SP144-201ENST00000410846 116 ntBASIC1.83□□□□□ -2.12
APPP05067 AC008267.6-201ENST00000441664 139 ntBASIC1.83□□□□□ -2.12
APPP05067 RNU7-164P-201ENST00000459221 62 ntBASIC1.83□□□□□ -2.12
APPP05067 RNU6-313P-201ENST00000516317 112 ntBASIC1.83□□□□□ -2.12
APPP05067 RNU6-479P-201ENST00000516348 105 ntBASIC1.83□□□□□ -2.12
APPP05067 RNU6-62P-201ENST00000516526 102 ntBASIC1.83□□□□□ -2.12
APPP05067 CYP3A52P-201ENST00000563326 91 ntBASIC1.83□□□□□ -2.12
APPP05067 Y_RNA.454-201ENST00000384224 113 ntBASIC1.82□□□□□ -2.12
APPP05067 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
APPP05067 MIRLET7F2-201ENST00000385277 83 ntBASIC1.82□□□□□ -2.12
APPP05067 RNA5SP95-201ENST00000410319 137 ntBASIC1.82□□□□□ -2.12
APPP05067 RNU7-73P-201ENST00000458743 63 ntBASIC1.82□□□□□ -2.12
APPP05067 RNU6-1053P-201ENST00000515930 101 ntBASIC1.82□□□□□ -2.12
APPP05067 SNORA44.1-201ENST00000517031 108 ntBASIC1.82□□□□□ -2.12
APPP05067 MIR4305-201ENST00000583252 102 ntBASIC1.82□□□□□ -2.12
APPP05067 PRELID3BP2-201ENST00000605362 201 ntBASIC1.82□□□□□ -2.12
APPP05067 MIR3914-2-201ENST00000637339 95 ntBASIC1.82□□□□□ -2.12
APPP05067 RNA5SP205-201ENST00000364653 136 ntBASIC1.81□□□□□ -2.12
APPP05067 SNORA1.1-201ENST00000364671 133 ntBASIC1.81□□□□□ -2.12
APPP05067 Y_RNA.298-201ENST00000364960 107 ntBASIC1.81□□□□□ -2.12
APPP05067 Y_RNA.470-201ENST00000384307 117 ntBASIC1.81□□□□□ -2.12
APPP05067 MIR1185-1-201ENST00000408598 86 ntBASIC1.81□□□□□ -2.12
APPP05067 AC048334.1-201ENST00000477975 159 ntBASIC1.81□□□□□ -2.12
APPP05067 RNU7-53P-201ENST00000516705 60 ntBASIC1.81□□□□□ -2.12
APPP05067 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
APPP05067 RNU6-654P-201ENST00000364373 107 ntBASIC1.8□□□□□ -2.12
APPP05067 Y_RNA.528-201ENST00000384575 108 ntBASIC1.8□□□□□ -2.12
APPP05067 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
APPP05067 RNU1-78P-201ENST00000391248 165 ntBASIC1.8□□□□□ -2.12
APPP05067 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
APPP05067 RNU6-602P-201ENST00000411155 105 ntBASIC1.8□□□□□ -2.12
APPP05067 snoU13.16-201ENST00000459350 104 ntBASIC1.8□□□□□ -2.12
APPP05067 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.8□□□□□ -2.12
APPP05067 Y_RNA.712-201ENST00000517011 92 ntBASIC1.8□□□□□ -2.12
APPP05067 AC025166.1-201ENST00000612411 163 ntBASIC1.8□□□□□ -2.12
APPP05067 MIR6841-201ENST00000637129 72 ntBASIC1.8□□□□□ -2.12
APPP05067 MTND5P18-201ENST00000445624 1801 ntBASIC1.8□□□□□ -2.12
APPP05067 SNORA22.1-201ENST00000362701 134 ntBASIC1.79□□□□□ -2.12
APPP05067 Y_RNA.363-201ENST00000365529 113 ntBASIC1.79□□□□□ -2.12
APPP05067 SNORA70.7-201ENST00000384159 133 ntBASIC1.79□□□□□ -2.12
APPP05067 SNORD12C-201ENST00000386307 89 ntBASIC1.79□□□□□ -2.12
APPP05067 RNU6-1319P-201ENST00000390855 104 ntBASIC1.79□□□□□ -2.12
APPP05067 RNU6-747P-201ENST00000390928 104 ntBASIC1.79□□□□□ -2.12
APPP05067 RNU6-241P-201ENST00000391148 104 ntBASIC1.79□□□□□ -2.12
APPP05067 RNU6-177P-201ENST00000411257 104 ntBASIC1.79□□□□□ -2.12
APPP05067 Y_RNA.353-201ENST00000365440 108 ntBASIC1.78□□□□□ -2.12
APPP05067 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
APPP05067 AL354695.1-201ENST00000427935 228 ntBASIC1.78□□□□□ -2.12
APPP05067 MIR1270-201ENST00000459320 83 ntBASIC1.78□□□□□ -2.12
APPP05067 RNU6-113P-201ENST00000516653 101 ntBASIC1.78□□□□□ -2.12
APPP05067 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
APPP05067 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
APPP05067 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
APPP05067 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.78□□□□□ -2.12
APPP05067 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
APPP05067 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
APPP05067 MIR378A-201ENST00000362177 66 ntBASIC1.77□□□□□ -2.13
APPP05067 RNU6-342P-201ENST00000384521 104 ntBASIC1.77□□□□□ -2.13
APPP05067 MIR548A1-201ENST00000385041 97 ntBASIC1.77□□□□□ -2.13
APPP05067 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
APPP05067 RPS29P23-201ENST00000458635 123 ntBASIC1.77□□□□□ -2.13
APPP05067 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
APPP05067 AP003716.2-201ENST00000528260 108 ntBASIC1.77□□□□□ -2.13
APPP05067 AC004812.1-201ENST00000540773 146 ntBASIC1.77□□□□□ -2.13
APPP05067 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
APPP05067 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
APPP05067 uc_338.6-201ENST00000613544 171 ntBASIC1.77□□□□□ -2.13
APPP05067 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
APPP05067 MIR8065-201ENST00000620577 100 ntBASIC1.77□□□□□ -2.13
APPP05067 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
APPP05067 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
APPP05067 RNU6-1065P-201ENST00000384513 106 ntBASIC1.76□□□□□ -2.13
APPP05067 RNU6-429P-201ENST00000384582 108 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms