Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LDLRP01130 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
LDLRP01130 Y_RNA.336-201ENST00000365307 109 ntBASIC1.41□□□□□ -2.18
LDLRP01130 Y_RNA.346-201ENST00000365385 112 ntBASIC1.41□□□□□ -2.18
LDLRP01130 SNORA2.2-201ENST00000365473 135 ntBASIC1.41□□□□□ -2.18
LDLRP01130 RNU6-1189P-201ENST00000383958 107 ntBASIC1.41□□□□□ -2.18
LDLRP01130 Y_RNA.440-201ENST00000384120 114 ntBASIC1.41□□□□□ -2.18
LDLRP01130 Y_RNA.494-201ENST00000384432 111 ntBASIC1.41□□□□□ -2.18
LDLRP01130 Y_RNA.528-201ENST00000384575 108 ntBASIC1.41□□□□□ -2.18
LDLRP01130 MT-TI-201ENST00000387365 69 ntBASIC1.41□□□□□ -2.18
LDLRP01130 RNU6-240P-201ENST00000516098 97 ntBASIC1.41□□□□□ -2.18
LDLRP01130 RNU6-113P-201ENST00000516653 101 ntBASIC1.41□□□□□ -2.18
LDLRP01130 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
LDLRP01130 MIR3613-201ENST00000579844 87 ntBASIC1.41□□□□□ -2.18
LDLRP01130 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.41□□□□□ -2.18
LDLRP01130 SNORD114-26-201ENST00000363543 72 ntBASIC1.4□□□□□ -2.19
LDLRP01130 Y_RNA.242-201ENST00000364473 110 ntBASIC1.4□□□□□ -2.19
LDLRP01130 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
LDLRP01130 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
LDLRP01130 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
LDLRP01130 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.4□□□□□ -2.19
LDLRP01130 HSPE1P19-201ENST00000603327 295 ntBASIC1.4□□□□□ -2.19
LDLRP01130 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
LDLRP01130 AL137067.1-201ENST00000615933 120 ntBASIC1.4□□□□□ -2.19
LDLRP01130 AL121890.5-201ENST00000620848 304 ntBASIC1.4□□□□□ -2.19
LDLRP01130 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LDLRP01130 Y_RNA.549-201ENST00000384657 102 ntBASIC1.39□□□□□ -2.19
LDLRP01130 AP003484.1-201ENST00000530974 250 ntBASIC1.39□□□□□ -2.19
LDLRP01130 AC027279.3-201ENST00000625055 122 ntBASIC1.39□□□□□ -2.19
LDLRP01130 RNU6-53P-201ENST00000365367 106 ntBASIC1.38□□□□□ -2.19
LDLRP01130 RNU6-880P-201ENST00000384526 107 ntBASIC1.38□□□□□ -2.19
LDLRP01130 MIR802-201ENST00000390235 94 ntBASIC1.38□□□□□ -2.19
LDLRP01130 RNA5SP136-201ENST00000410906 107 ntBASIC1.38□□□□□ -2.19
LDLRP01130 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
LDLRP01130 MIR6779-201ENST00000617283 64 ntBASIC1.38□□□□□ -2.19
LDLRP01130 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
LDLRP01130 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
LDLRP01130 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
LDLRP01130 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
LDLRP01130 SNORD33-201ENST00000362761 85 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNU6-833P-201ENST00000363486 107 ntBASIC1.37□□□□□ -2.19
LDLRP01130 Y_RNA.281-201ENST00000364774 94 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNU6-106P-201ENST00000384405 107 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNU6-1104P-201ENST00000384723 104 ntBASIC1.37□□□□□ -2.19
LDLRP01130 SNX2P2-201ENST00000424553 323 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AC087499.4-201ENST00000448505 178 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNU6-830P-201ENST00000516353 107 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
LDLRP01130 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AC007012.1-201ENST00000567192 175 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
LDLRP01130 AL035470.1-201ENST00000622571 220 ntBASIC1.37□□□□□ -2.19
LDLRP01130 Y_RNA.351-201ENST00000365436 96 ntBASIC1.36□□□□□ -2.19
LDLRP01130 MIR570-201ENST00000384917 97 ntBASIC1.36□□□□□ -2.19
LDLRP01130 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
LDLRP01130 RNA5SP89-201ENST00000410300 108 ntBASIC1.36□□□□□ -2.19
LDLRP01130 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
LDLRP01130 HMGN2P32-201ENST00000444648 269 ntBASIC1.36□□□□□ -2.19
LDLRP01130 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.36□□□□□ -2.19
LDLRP01130 COX6CP6-201ENST00000490840 228 ntBASIC1.36□□□□□ -2.19
LDLRP01130 RNU6-917P-201ENST00000516294 104 ntBASIC1.36□□□□□ -2.19
LDLRP01130 RNY4P20-201ENST00000516678 93 ntBASIC1.36□□□□□ -2.19
LDLRP01130 MIR4679-2-201ENST00000578358 77 ntBASIC1.36□□□□□ -2.19
LDLRP01130 uc_338.28-201ENST00000612082 187 ntBASIC1.36□□□□□ -2.19
LDLRP01130 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.36□□□□□ -2.19
LDLRP01130 AC091932.4-201ENST00000623386 200 ntBASIC1.36□□□□□ -2.19
LDLRP01130 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LDLRP01130 MIR450A1-201ENST00000362262 91 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNA5SP325-201ENST00000363756 130 ntBASIC1.35□□□□□ -2.19
LDLRP01130 Y_RNA.198-201ENST00000364013 98 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNU6-690P-201ENST00000365242 106 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNY1P6-201ENST00000384193 109 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNU6-554P-201ENST00000410466 106 ntBASIC1.35□□□□□ -2.19
LDLRP01130 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.35□□□□□ -2.19
LDLRP01130 RNU2-35P-201ENST00000516446 142 ntBASIC1.35□□□□□ -2.19
LDLRP01130 SNORA18.7-201ENST00000516910 131 ntBASIC1.35□□□□□ -2.19
LDLRP01130 RNU7-181P-201ENST00000517234 74 ntBASIC1.35□□□□□ -2.19
LDLRP01130 AC022523.2-201ENST00000561045 150 ntBASIC1.35□□□□□ -2.19
LDLRP01130 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
LDLRP01130 Y_RNA.85-201ENST00000363014 111 ntBASIC1.34□□□□□ -2.19
LDLRP01130 RNU6-1107P-201ENST00000364817 104 ntBASIC1.34□□□□□ -2.19
LDLRP01130 RNU1-133P-201ENST00000364867 167 ntBASIC1.34□□□□□ -2.19
LDLRP01130 Y_RNA.298-201ENST00000364960 107 ntBASIC1.34□□□□□ -2.19
LDLRP01130 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
LDLRP01130 SNORD38C-201ENST00000384381 69 ntBASIC1.34□□□□□ -2.19
LDLRP01130 MIR526A1-201ENST00000384897 85 ntBASIC1.34□□□□□ -2.19
LDLRP01130 MIR516B2-201ENST00000385190 85 ntBASIC1.34□□□□□ -2.19
LDLRP01130 SNORD12C-201ENST00000386307 89 ntBASIC1.34□□□□□ -2.19
LDLRP01130 RNU7-123P-201ENST00000515911 60 ntBASIC1.34□□□□□ -2.19
LDLRP01130 RNU6-168P-201ENST00000516189 101 ntBASIC1.34□□□□□ -2.19
LDLRP01130 AC021443.1-201ENST00000604478 211 ntBASIC1.34□□□□□ -2.19
LDLRP01130 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
LDLRP01130 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
LDLRP01130 AL596211.1-201ENST00000569873 2277 ntBASIC1.33□□□□□ -2.2
LDLRP01130 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
LDLRP01130 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
LDLRP01130 SNORA27-201ENST00000384323 126 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms