Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.92□□□□□ -2.1
RAPGEF3O95398 Y_RNA.494-201ENST00000384432 111 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 Y_RNA.586-201ENST00000391146 98 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 AL035398.1-201ENST00000430869 322 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 SNORD111.1-201ENST00000516421 86 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 RNU6-113P-201ENST00000516653 101 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 RNU2-60P-201ENST00000517290 128 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 MIR5000-201ENST00000577717 103 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 Y_RNA.757-201ENST00000578934 114 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 AC243994.1-201ENST00000618627 109 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
RAPGEF3O95398 RNU1-133P-201ENST00000364867 167 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 SNORA51.10-201ENST00000384418 136 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 SNORA20-201ENST00000384662 132 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 RNU6-257P-201ENST00000410238 98 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 MTND4LP9-201ENST00000427694 174 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.9□□□□□ -2.11
RAPGEF3O95398 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 RNU7-67P-201ENST00000459003 62 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 Y_RNA.690-201ENST00000516603 95 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 MIR3910-1-201ENST00000580936 111 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 MIR4791-201ENST00000607666 84 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 AC011603.4-201ENST00000611325 277 ntBASIC1.9□□□□□ -2.11
RAPGEF3O95398 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RAPGEF3O95398 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAPGEF3O95398 MIR539-201ENST00000365690 78 ntBASIC1.89□□□□□ -2.11
RAPGEF3O95398 RNA5SP272-201ENST00000516095 111 ntBASIC1.89□□□□□ -2.11
RAPGEF3O95398 Y_RNA.686-201ENST00000516548 134 ntBASIC1.89□□□□□ -2.11
RAPGEF3O95398 MIR302B-201ENST00000362188 73 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 RNY1P4-201ENST00000384595 115 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 RNU7-73P-201ENST00000458743 63 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 snoU13.16-201ENST00000459350 104 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 RNU6-902P-201ENST00000517212 91 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 MIR3664-201ENST00000579074 99 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 AC091932.4-201ENST00000623386 200 ntBASIC1.88□□□□□ -2.11
RAPGEF3O95398 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
RAPGEF3O95398 RNU6-81P-201ENST00000365608 104 ntBASIC1.87□□□□□ -2.11
RAPGEF3O95398 RNU6-970P-201ENST00000516312 107 ntBASIC1.87□□□□□ -2.11
RAPGEF3O95398 RNU6-958P-201ENST00000516995 106 ntBASIC1.87□□□□□ -2.11
RAPGEF3O95398 MIR3121-201ENST00000579680 77 ntBASIC1.87□□□□□ -2.11
RAPGEF3O95398 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.87□□□□□ -2.11
RAPGEF3O95398 MIR373-201ENST00000362273 69 ntBASIC1.86□□□□□ -2.11
RAPGEF3O95398 RNA5SP61-201ENST00000516453 100 ntBASIC1.86□□□□□ -2.11
RAPGEF3O95398 MIR4251-201ENST00000635819 61 ntBASIC1.86□□□□□ -2.11
RAPGEF3O95398 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
RAPGEF3O95398 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RAPGEF3O95398 MIR570-201ENST00000384917 97 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 RNA5SP261-201ENST00000410536 106 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 RNU2-11P-201ENST00000459191 187 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 RNU6-406P-201ENST00000516470 107 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 AL022345.2-201ENST00000606307 135 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 AL121890.5-201ENST00000620848 304 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 AL596211.1-201ENST00000569873 2277 ntBASIC1.85□□□□□ -2.11
RAPGEF3O95398 MIR342-201ENST00000362212 99 ntBASIC1.84□□□□□ -2.11
RAPGEF3O95398 RNU6-309P-201ENST00000364573 106 ntBASIC1.84□□□□□ -2.11
RAPGEF3O95398 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
RAPGEF3O95398 AL096861.1-201ENST00000610899 123 ntBASIC1.84□□□□□ -2.11
RAPGEF3O95398 RNY1P6-201ENST00000384193 109 ntBASIC1.83□□□□□ -2.12
RAPGEF3O95398 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.83□□□□□ -2.12
RAPGEF3O95398 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RAPGEF3O95398 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
RAPGEF3O95398 Y_RNA.651-201ENST00000459380 103 ntBASIC1.83□□□□□ -2.12
RAPGEF3O95398 AP000648.3-201ENST00000623539 4507 ntBASIC1.82□□□□□ -2.12
RAPGEF3O95398 AL133373.1-201ENST00000497098 94 ntBASIC1.82□□□□□ -2.12
RAPGEF3O95398 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
RAPGEF3O95398 RNU6-349P-201ENST00000362402 107 ntBASIC1.81□□□□□ -2.12
RAPGEF3O95398 RNU6-647P-201ENST00000364243 107 ntBASIC1.81□□□□□ -2.12
RAPGEF3O95398 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
RAPGEF3O95398 MIR3152-201ENST00000579801 74 ntBASIC1.81□□□□□ -2.12
RAPGEF3O95398 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.81□□□□□ -2.12
RAPGEF3O95398 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RAPGEF3O95398 Y_RNA.114-201ENST00000363265 113 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 Y_RNA.280-201ENST00000364765 112 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 MIR216A-201ENST00000385063 110 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 RNU6-1319P-201ENST00000390855 104 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 RNU6-747P-201ENST00000390928 104 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 RNU6-241P-201ENST00000391148 104 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 RNU6-177P-201ENST00000411257 104 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 RNU6-893P-201ENST00000458841 100 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 AC068338.1-201ENST00000565567 176 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 AL020996.3-201ENST00000606617 222 ntBASIC1.8□□□□□ -2.12
RAPGEF3O95398 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
RAPGEF3O95398 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RAPGEF3O95398 RNU6-690P-201ENST00000365242 106 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 RNU6-959P-201ENST00000384671 107 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 AL158147.1-201ENST00000443970 75 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 RPS23P4-201ENST00000487908 423 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 RNU5E-3P-201ENST00000515913 68 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 RN7SKP88-201ENST00000516847 250 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 MIR4295-201ENST00000585286 85 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 7SK.8-201ENST00000612110 250 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 7SK.11-201ENST00000615477 250 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 7SK.13-201ENST00000622040 250 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 AC021613.1-201ENST00000623880 111 ntBASIC1.79□□□□□ -2.12
RAPGEF3O95398 SNORD113-1-201ENST00000365321 69 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 RNU6-913P-201ENST00000390913 95 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms