| ATE1 | O95260 | MIR548AE2-201 | ENST00000583456 | 67 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC087741.2-201 | ENST00000619415 | 172 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | SNORD38B-202 | ENST00000625943 | 69 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AL162726.3-218 | ENST00000636401 | 95 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | Z97988.1-201 | ENST00000637697 | 135 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC008163.1-205 | ENST00000413944 | 4649 nt | TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNA5SP99-201 | ENST00000364020 | 114 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | U8.6-201 | ENST00000364939 | 135 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | Y_RNA.323-201 | ENST00000365157 | 109 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | SNORA51.5-201 | ENST00000384126 | 131 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-816P-201 | ENST00000390914 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-1268P-201 | ENST00000391214 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | 5S_rRNA.2-201 | ENST00000391293 | 112 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-1239P-201 | ENST00000391310 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RPL23AP42-201 | ENST00000471152 | 471 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | Y_RNA.676-201 | ENST00000516393 | 96 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| ATE1 | O95260 | SNORD33-201 | ENST00000362761 | 85 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-32P-201 | ENST00000383948 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-756P-201 | ENST00000383997 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-13P-201 | ENST00000384248 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-12P-201 | ENST00000384604 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-41P-201 | ENST00000384741 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| ATE1 | O95260 | Y_RNA.155-201 | ENST00000363632 | 101 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-1065P-201 | ENST00000384513 | 106 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-602P-201 | ENST00000411155 | 105 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC019176.1-201 | ENST00000518519 | 225 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR3937-201 | ENST00000580135 | 106 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-94P-201 | ENST00000607728 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | AC034238.1-213 | ENST00000611148 | 150 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR6873-201 | ENST00000622788 | 63 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| ATE1 | O95260 | Y_RNA.495-201 | ENST00000384435 | 112 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6-168P-201 | ENST00000516189 | 101 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | RNU6ATAC12P-201 | ENST00000516542 | 115 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIR6766-201 | ENST00000622641 | 72 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| ATE1 | O95260 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-766P-201 | ENST00000362478 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORD1A-201 | ENST00000364968 | 72 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNA5SP364-201 | ENST00000516938 | 78 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AL096861.1-201 | ENST00000610899 | 123 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AL353997.5-201 | ENST00000618886 | 171 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AL161722.3-201 | ENST00000605789 | 2983 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORD115-19-201 | ENST00000363098 | 82 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORD115-18-201 | ENST00000363293 | 82 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORD115-17-201 | ENST00000364612 | 82 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORA18-201 | ENST00000384416 | 132 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-1237P-201 | ENST00000384777 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU1-40P-201 | ENST00000516816 | 164 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU1-97P-201 | ENST00000516872 | 164 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-537P-201 | ENST00000517277 | 103 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AC141557.1-201 | ENST00000540982 | 400 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AP001109.1-201 | ENST00000587114 | 279 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | Y_RNA.773-201 | ENST00000607168 | 90 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | MIR8065-201 | ENST00000620577 | 100 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SCN7A-201 | ENST00000409855 | 7183 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU4-67P-201 | ENST00000364569 | 141 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-409P-201 | ENST00000384114 | 104 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-616P-201 | ENST00000384353 | 107 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORA67.3-201 | ENST00000384366 | 140 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNA5SP89-201 | ENST00000410300 | 108 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AC090844.1-201 | ENST00000422019 | 156 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | MIR1255B1-201 | ENST00000636325 | 63 nt | BASIC | 2 | □□□□□ -2.09 | | |
| ATE1 | O95260 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-396P-201 | ENST00000365369 | 105 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | AC019129.1-201 | ENST00000403786 | 261 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNA5SP237-201 | ENST00000410414 | 113 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | SNORA7.5-201 | ENST00000410672 | 110 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | RNU6-733P-201 | ENST00000410759 | 104 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| ATE1 | O95260 | OR5M1-202 | ENST00000641076 | 4302 nt | APPRIS P1 BASIC | 1.98 | □□□□□ -2.09 | | |