Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MTND5P20-201ENST00000448677 143 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RPL39P25-201ENST00000449384 154 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNU6-1299P-201ENST00000516316 100 ntBASIC0□□□□□ -2.41
SEMA3DO95025 SNORA27.4-201ENST00000516650 95 ntBASIC0□□□□□ -2.41
SEMA3DO95025 RNU6-126P-201ENST00000516685 103 ntBASIC0□□□□□ -2.41
SEMA3DO95025 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0□□□□□ -2.41
SEMA3DO95025 MIR376A2-201ENST00000636782 80 ntBASIC0□□□□□ -2.41
SEMA3DO95025 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 RNU6-806P-201ENST00000365147 105 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 SNORA1-201ENST00000384107 130 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 U8.15-201ENST00000390947 134 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 RNU6-101P-201ENST00000410323 104 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 RPL21P38-201ENST00000418090 167 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 AL731563.1-201ENST00000442202 214 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 AC037487.3-201ENST00000606668 112 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 MIR7107-201ENST00000611489 80 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 AL662814.1-201ENST00000617364 121 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 AC067863.3-201ENST00000624172 122 ntBASIC-0.01□□□□□ -2.41
SEMA3DO95025 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 RNU6-484P-201ENST00000384016 107 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 RNU6-211P-201ENST00000384047 107 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 SNORA8.3-201ENST00000384679 139 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 MIR626-201ENST00000385032 94 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 MT-TT-201ENST00000387460 66 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 SNRPGP8-201ENST00000454064 226 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 MTND4LP30-201ENST00000454092 297 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 RNY3P15-201ENST00000516297 97 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 SNORA31.14-201ENST00000516728 116 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 SNORA40.15-201ENST00000516884 107 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 MIR5688-201ENST00000580619 83 ntBASIC-0.02□□□□□ -2.41
SEMA3DO95025 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 RNU6-653P-201ENST00000363074 106 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 MIR329-2-201ENST00000385029 84 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 MIR6082-201ENST00000613604 109 ntBASIC-0.03□□□□□ -2.41
SEMA3DO95025 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 RNA5SP98-201ENST00000363158 137 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 RNU6-770P-201ENST00000363929 105 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 SNORD42.2-201ENST00000365570 69 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 RNU6-187P-201ENST00000384139 106 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 SNORA26-201ENST00000391286 122 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.04□□□□□ -2.42
SEMA3DO95025 RNA5SP285-201ENST00000516619 119 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 MIR4491-201ENST00000581087 68 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 MIR548S-201ENST00000581352 82 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.04□□□□□ -2.42
SEMA3DO95025 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
SEMA3DO95025 SNORA9.1-201ENST00000362412 131 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 RNU2-55P-201ENST00000411146 174 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 AC096949.1-201ENST00000412047 152 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 AC141846.1-201ENST00000568348 142 ntBASIC-0.05□□□□□ -2.42
SEMA3DO95025 AL596211.1-201ENST00000569873 2277 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 UBE2WP1-201ENST00000362030 340 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 SNORA72.6-201ENST00000384520 129 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNA5SP261-201ENST00000410536 106 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNA5SP153-201ENST00000516498 76 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 RNU6-453P-201ENST00000516819 85 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 MIR3129-201ENST00000581095 76 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 AC091932.4-201ENST00000623386 200 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 MIR6828-201ENST00000636181 60 ntBASIC-0.06□□□□□ -2.42
SEMA3DO95025 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
SEMA3DO95025 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 RNU6-474P-201ENST00000384243 107 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 RNU6-291P-201ENST00000384720 107 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 MTND5P22-201ENST00000458380 195 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 RNU7-129P-201ENST00000516128 62 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms