Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORD13-201ENST00000459299 104 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 RNU6-548P-201ENST00000517083 115 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 SNORA77B-201ENST00000578179 125 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 MIR4764-201ENST00000580680 88 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 MIR502-201ENST00000606349 86 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 AL020996.3-201ENST00000606617 222 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 MIR8055-201ENST00000610739 97 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 AC106754.2-201ENST00000623006 233 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 MIR6841-201ENST00000637129 72 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 AL589743.1-201ENST00000551932 2712 ntBASIC2.1□□□□□ -2.07
VAMP4O75379 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VAMP4O75379 Y_RNA.49-201ENST00000362714 112 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 RNU6-147P-201ENST00000383983 107 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 Y_RNA.549-201ENST00000384657 102 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VAMP4O75379 RNU6-913P-201ENST00000390913 95 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 AL512326.2-201ENST00000426359 151 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 RPL39P34-201ENST00000477141 156 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.09□□□□□ -2.07
VAMP4O75379 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.09□□□□□ -2.07
VAMP4O75379 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 RNU6-94P-201ENST00000607728 107 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 MIR6717-201ENST00000622747 73 ntBASIC2.09□□□□□ -2.07
VAMP4O75379 Y_RNA.299-201ENST00000364973 94 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 Y_RNA.362-201ENST00000365518 110 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 RNU6-106P-201ENST00000384405 107 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 MIR520C-201ENST00000385005 87 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 RNU7-45P-201ENST00000459460 63 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 RPS23P4-201ENST00000487908 423 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 AC022523.2-201ENST00000561045 150 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
VAMP4O75379 Y_RNA.116-201ENST00000363292 103 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 Y_RNA.323-201ENST00000365157 109 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 SNORA51.10-201ENST00000384418 136 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 MIR548D2-201ENST00000384955 97 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 MIR3613-201ENST00000579844 87 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 AL513534.2-201ENST00000603836 250 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 AC008133.2-201ENST00000624540 351 ntBASIC2.07□□□□□ -2.08
VAMP4O75379 AL451046.2-201ENST00000403074 277 ntBASIC2.06□□□□□ -2.08
VAMP4O75379 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.06□□□□□ -2.08
VAMP4O75379 AC015688.6-201ENST00000577737 104 ntBASIC2.06□□□□□ -2.08
VAMP4O75379 MIR8074-201ENST00000615081 81 ntBASIC2.06□□□□□ -2.08
VAMP4O75379 AL035470.1-201ENST00000622571 220 ntBASIC2.06□□□□□ -2.08
VAMP4O75379 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VAMP4O75379 SNORA22.1-201ENST00000362701 134 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 SNORA63.5-201ENST00000363548 123 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 RNU6-439P-201ENST00000384188 106 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VAMP4O75379 AL031737.1-201ENST00000450125 223 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 RNU7-113P-201ENST00000459273 62 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 AC113410.1-201ENST00000505029 247 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 RNU6-1258P-201ENST00000516911 111 ntBASIC2.05□□□□□ -2.08
VAMP4O75379 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VAMP4O75379 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.05□□□□□ -2.08
VAMP4O75379 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAMP4O75379 RNA5SP99-201ENST00000364020 114 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 Y_RNA.344-201ENST00000365381 112 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 RNU6-1014P-201ENST00000383940 103 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 RPS3AP1-201ENST00000413190 320 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 RNU7-6P-201ENST00000516845 62 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 Z97988.1-201ENST00000637697 135 ntBASIC2.04□□□□□ -2.08
VAMP4O75379 Y_RNA.171-201ENST00000363760 102 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 Y_RNA.309-201ENST00000365046 111 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 RNU4-69P-201ENST00000410677 143 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 MIR5009-201ENST00000578736 100 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 AC087741.2-201ENST00000619415 172 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.03□□□□□ -2.08
VAMP4O75379 SNORD115-19-201ENST00000363098 82 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 SNORD115-18-201ENST00000363293 82 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 SNORD115-17-201ENST00000364612 82 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 U8.6-201ENST00000364939 135 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 Y_RNA.354-201ENST00000365448 111 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 MIR1302-5-201ENST00000408164 150 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 RNU6-554P-201ENST00000410466 106 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 RNU6-1190P-201ENST00000410811 104 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 AC008834.1-201ENST00000511612 175 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 AC068339.1-201ENST00000526965 141 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 AL357312.1-201ENST00000603879 298 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 uc_338.28-201ENST00000612082 187 ntBASIC2.02□□□□□ -2.09
VAMP4O75379 Y_RNA.163-201ENST00000363702 113 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 SNORA1.1-201ENST00000364671 133 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.01□□□□□ -2.09
VAMP4O75379 MIR3198-2-201ENST00000577868 80 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 AL162726.3-218ENST00000636401 95 ntBASIC2.01□□□□□ -2.09
VAMP4O75379 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAMP4O75379 SNORD41-201ENST00000386967 70 ntBASIC2□□□□□ -2.09
VAMP4O75379 MIR1323-201ENST00000408090 73 ntBASIC2□□□□□ -2.09
VAMP4O75379 MIR1912-201ENST00000410389 80 ntBASIC2□□□□□ -2.09
VAMP4O75379 RNA5SP33-201ENST00000516687 98 ntBASIC2□□□□□ -2.09
VAMP4O75379 AL645939.4-201ENST00000604495 135 ntBASIC2□□□□□ -2.09
VAMP4O75379 MIR4251-201ENST00000635819 61 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms