Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 AL512326.2-201ENST00000426359 151 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXN1O15353 STAG3L5P-204ENST00000443759 179 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 RNU7-28P-201ENST00000516759 62 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 DEFB131E-201ENST00000532329 154 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 AC087741.2-201ENST00000619415 172 ntBASIC2.03□□□□□ -2.08
FOXN1O15353 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
FOXN1O15353 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
FOXN1O15353 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 RNU6-23P-201ENST00000363283 107 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 SNORA27-201ENST00000384323 126 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 RNU6-163P-201ENST00000384396 106 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIR1912-201ENST00000410389 80 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 RNU6-592P-201ENST00000411333 103 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 PGBD4P5-201ENST00000445958 426 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 RPS29P1-201ENST00000465274 159 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXN1O15353 AL513534.2-201ENST00000603836 250 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 MIR1245B-201ENST00000636115 69 ntBASIC2.02□□□□□ -2.09
FOXN1O15353 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXN1O15353 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
FOXN1O15353 RNY3P2-201ENST00000362918 102 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 Y_RNA.107-201ENST00000363190 121 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 Y_RNA.241-201ENST00000364470 117 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 RNU6-60P-201ENST00000364792 103 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SNORD38C-201ENST00000384381 69 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 MIR520E-201ENST00000384867 87 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 RNA5SP144-201ENST00000410846 116 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 AC113410.1-201ENST00000505029 247 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SCARNA23-201ENST00000516060 130 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 RN7SKP12-201ENST00000516275 143 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 AP003327.1-201ENST00000529684 127 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 SNORD53B-201ENST00000577887 78 ntBASIC2.01□□□□□ -2.09
FOXN1O15353 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXN1O15353 RNU6-1099P-201ENST00000363533 107 ntBASIC2□□□□□ -2.09
FOXN1O15353 RNU4-36P-201ENST00000364294 144 ntBASIC2□□□□□ -2.09
FOXN1O15353 RNU1-93P-201ENST00000364704 169 ntBASIC2□□□□□ -2.09
FOXN1O15353 Y_RNA.531-201ENST00000384589 121 ntBASIC2□□□□□ -2.09
FOXN1O15353 MIR450A2-201ENST00000385022 100 ntBASIC2□□□□□ -2.09
FOXN1O15353 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
FOXN1O15353 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
FOXN1O15353 SNORA31.25-201ENST00000517242 134 ntBASIC2□□□□□ -2.09
FOXN1O15353 AC026421.1-201ENST00000519101 163 ntBASIC2□□□□□ -2.09
FOXN1O15353 AC004812.1-201ENST00000540773 146 ntBASIC2□□□□□ -2.09
FOXN1O15353 MIR4421-201ENST00000578133 69 ntBASIC2□□□□□ -2.09
FOXN1O15353 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
FOXN1O15353 Y_RNA.773-201ENST00000607168 90 ntBASIC2□□□□□ -2.09
FOXN1O15353 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2□□□□□ -2.09
FOXN1O15353 IST1-227ENST00000626438 126 ntTSL 5 BASIC2□□□□□ -2.09
FOXN1O15353 MIR1255B1-201ENST00000636325 63 ntBASIC2□□□□□ -2.09
FOXN1O15353 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
FOXN1O15353 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
FOXN1O15353 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
FOXN1O15353 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
FOXN1O15353 MIR494-201ENST00000349529 81 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 Y_RNA.68-201ENST00000362881 102 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 RNU6-820P-201ENST00000384273 107 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 RNU6-1275P-201ENST00000391087 107 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 AL035398.1-201ENST00000430869 322 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 AC015922.2-201ENST00000435593 184 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXN1O15353 RNU6-893P-201ENST00000458841 100 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 RNU7-45P-201ENST00000459460 63 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 RNU6-998P-201ENST00000515894 101 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 RNU7-181P-201ENST00000517234 74 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 AC021613.1-201ENST00000623880 111 ntBASIC1.99□□□□□ -2.09
FOXN1O15353 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
FOXN1O15353 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
FOXN1O15353 RNU6-1134P-201ENST00000365156 101 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 Y_RNA.601-201ENST00000410500 113 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 AL022718.1-201ENST00000412004 84 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 RNU7-96P-201ENST00000459535 64 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 RPS23P4-201ENST00000487908 423 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 RNU7-193P-201ENST00000516723 65 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 AC090821.2-201ENST00000523552 176 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
FOXN1O15353 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 AC027279.3-201ENST00000625055 122 ntBASIC1.98□□□□□ -2.09
FOXN1O15353 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
FOXN1O15353 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
FOXN1O15353 RNU6-363P-201ENST00000362895 105 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 Y_RNA.507-201ENST00000384500 99 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 RNU6-1152P-201ENST00000384576 107 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 MIR518A2-201ENST00000384966 87 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
FOXN1O15353 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms