Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU6-241P-201ENST00000391148 104 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 Y_RNA.611-201ENST00000410682 108 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 RNU6-177P-201ENST00000411257 104 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 UBBP3-201ENST00000445497 241 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 SCARNA16.3-201ENST00000516595 184 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 RNU6-958P-201ENST00000516995 106 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 MIR5094-201ENST00000578766 85 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 Y_RNA.783-201ENST00000613546 102 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.28□□□□□ -2.04
RFXAPO00287 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFXAPO00287 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 SNORD56.5-201ENST00000364281 72 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 SNORA1.1-201ENST00000364671 133 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 MIR489-201ENST00000384923 84 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 MIR597-201ENST00000384968 97 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 MIR889-201ENST00000401280 79 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 RNU6-1006P-201ENST00000516998 103 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 AC020891.4-201ENST00000605745 93 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 AC103810.7-201ENST00000607821 91 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 AC027279.3-201ENST00000625055 122 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 AL512310.12-203ENST00000640543 90 ntBASIC2.27□□□□□ -2.05
RFXAPO00287 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFXAPO00287 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.27□□□□□ -2.05
RFXAPO00287 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RFXAPO00287 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 Y_RNA.299-201ENST00000364973 94 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 RNU6-342P-201ENST00000384521 104 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 RNU6-321P-201ENST00000410912 106 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.26□□□□□ -2.05
RFXAPO00287 MIR4446-201ENST00000578505 67 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 MIR8070-201ENST00000616510 88 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 MIR548BB-201ENST00000626714 66 ntBASIC2.26□□□□□ -2.05
RFXAPO00287 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFXAPO00287 SNORD115-27-201ENST00000364430 82 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 RNU6-1163P-201ENST00000364516 107 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 RNU6-652P-201ENST00000365488 107 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 SNORD58A-201ENST00000383875 65 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 RNU6-1296P-201ENST00000383879 107 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 MIR526A1-201ENST00000384897 85 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 SNORD77B-201ENST00000391112 67 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.25□□□□□ -2.05
RFXAPO00287 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 RNU6-1018P-201ENST00000516577 106 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.25□□□□□ -2.05
RFXAPO00287 RNU6-86P-201ENST00000606534 107 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 AL020996.3-201ENST00000606617 222 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 MIR6717-201ENST00000622747 73 ntBASIC2.25□□□□□ -2.05
RFXAPO00287 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
RFXAPO00287 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFXAPO00287 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.24□□□□□ -2.05
RFXAPO00287 RNU6-833P-201ENST00000363486 107 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 Y_RNA.370-201ENST00000365589 108 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 MIR34C-201ENST00000384831 77 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 RNU7-67P-201ENST00000459003 62 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 RPPH1-2P-201ENST00000516688 293 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 MIR548AR-201ENST00000582191 57 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 AC069114.2-201ENST00000604699 304 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
RFXAPO00287 MIR206-201ENST00000384872 86 ntBASIC2.23□□□□□ -2.05
RFXAPO00287 MIR499A-201ENST00000384903 122 ntBASIC2.23□□□□□ -2.05
RFXAPO00287 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
RFXAPO00287 RPS29P29-201ENST00000456396 171 ntBASIC2.23□□□□□ -2.05
RFXAPO00287 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.23□□□□□ -2.05
RFXAPO00287 SNORA28-201ENST00000606769 126 ntBASIC2.23□□□□□ -2.05
RFXAPO00287 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFXAPO00287 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFXAPO00287 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.22□□□□□ -2.05
RFXAPO00287 RNU6-509P-201ENST00000363519 107 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 SNORD116-10-201ENST00000363791 102 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 SNORA24-201ENST00000384096 131 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 Y_RNA.609-201ENST00000410669 89 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 Z96811.1-201ENST00000445880 108 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 RNU7-2P-201ENST00000516096 62 ntBASIC2.22□□□□□ -2.05
RFXAPO00287 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFXAPO00287 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
RFXAPO00287 MIR337-201ENST00000362281 93 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNU1-58P-201ENST00000362413 163 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNU6-1019P-201ENST00000364424 107 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 Y_RNA.426-201ENST00000384068 113 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNU6-24P-201ENST00000384440 107 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RFXAPO00287 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 SNORD13-201ENST00000459299 104 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 RNA5SP437-201ENST00000517249 129 ntBASIC2.21□□□□□ -2.06
RFXAPO00287 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
RFXAPO00287 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFXAPO00287 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RFXAPO00287 Y_RNA.94-201ENST00000363068 106 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 Y_RNA.316-201ENST00000365118 111 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 Y_RNA.430-201ENST00000384081 110 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 SNORD123-201ENST00000459473 70 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 SNRPGP19-201ENST00000603826 189 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms