Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-550P-201ENST00000391057 101 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 MTCO2P5-201ENST00000422621 426 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 AC097635.1-201ENST00000450678 155 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 RPL39P36-201ENST00000490784 156 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 MIR548AH-201ENST00000637109 76 ntBASIC-1.67□□□□□ -2.68
COL6A5A8TX70 MIR519A2-201ENST00000384990 87 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 RPL39P6-201ENST00000448289 150 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.68□□□□□ -2.68
COL6A5A8TX70 MTND1P24-201ENST00000552175 861 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 U3.4-201ENST00000363352 213 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 MTCO3P19-201ENST00000415864 321 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.68□□□□□ -2.68
COL6A5A8TX70 MIR4637-201ENST00000582405 84 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.68□□□□□ -2.68
COL6A5A8TX70 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 SNORA51.5-201ENST00000384126 131 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 MIR521-2-201ENST00000384818 87 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 RNU6-885P-201ENST00000516607 104 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 RNU6-527P-201ENST00000363425 104 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 SNORD116-30-201ENST00000516468 85 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 AC012467.1-201ENST00000607740 256 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 U4.7-201ENST00000638126 106 ntBASIC-1.69□□□□□ -2.68
COL6A5A8TX70 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNU6-458P-201ENST00000384179 107 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AC010598.1-201ENST00000510378 103 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNU6-719P-201ENST00000516671 104 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNA5SP135-201ENST00000517019 125 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AC022878.1-201ENST00000530684 149 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AC087752.4-201ENST00000605911 462 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 U6.58-201ENST00000613107 107 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 MTND1P2-201ENST00000430604 821 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.7□□□□□ -2.68
COL6A5A8TX70 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.7□□□□□ -2.68
COL6A5A8TX70 MIR208B-201ENST00000401172 77 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 MIR548N-201ENST00000408742 75 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AL049829.1-201ENST00000465411 156 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 AL669831.3-213ENST00000636676 183 ntBASIC-1.7□□□□□ -2.68
COL6A5A8TX70 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 AL031003.1-201ENST00000404229 172 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.71□□□□□ -2.68
COL6A5A8TX70 MTATP6P21-201ENST00000440681 189 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.71□□□□□ -2.68
COL6A5A8TX70 ACA59.1-201ENST00000515966 143 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 U6.109-201ENST00000636749 87 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 RNU6-481P-201ENST00000384194 107 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 MTCO2P27-201ENST00000420740 428 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 AC114878.1-201ENST00000441166 358 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 SNRPGP7-201ENST00000469016 106 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.71□□□□□ -2.68
COL6A5A8TX70 RNU6-430P-201ENST00000517078 107 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 SCOCP1-201ENST00000554676 349 ntBASIC-1.71□□□□□ -2.68
COL6A5A8TX70 MRPS10P1-201ENST00000448483 130 ntBASIC-1.72□□□□□ -2.68
COL6A5A8TX70 RNU6-329P-201ENST00000459618 107 ntBASIC-1.72□□□□□ -2.68
COL6A5A8TX70 RNU6-914P-201ENST00000516749 109 ntBASIC-1.72□□□□□ -2.68
COL6A5A8TX70 AL133215.3-201ENST00000609801 448 ntBASIC-1.72□□□□□ -2.68
COL6A5A8TX70 AL078596.1-201ENST00000624856 447 ntBASIC-1.72□□□□□ -2.68
COL6A5A8TX70 SNORD50B-201ENST00000364995 70 ntBASIC-1.72□□□□□ -2.69
COL6A5A8TX70 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.72□□□□□ -2.69
COL6A5A8TX70 MIR1254-1-201ENST00000408257 97 ntBASIC-1.72□□□□□ -2.69
COL6A5A8TX70 MTND2P32-201ENST00000521584 1038 ntBASIC-1.72□□□□□ -2.69
COL6A5A8TX70 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.72□□□□□ -2.69
COL6A5A8TX70 RNU6-266P-201ENST00000364225 107 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 RNU6-597P-201ENST00000365620 102 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.73□□□□□ -2.69
COL6A5A8TX70 AC109479.2-201ENST00000517842 174 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 MIR3170-201ENST00000582699 77 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 RNU6-609P-201ENST00000365459 107 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 MIR579-201ENST00000385221 98 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 MIR216B-201ENST00000390186 82 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 AC004386.2-201ENST00000441858 148 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 MIR2113-201ENST00000459007 91 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 SNORD116-25-201ENST00000516517 92 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 AC026470.2-201ENST00000561492 181 ntBASIC-1.73□□□□□ -2.69
COL6A5A8TX70 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU6-995P-201ENST00000391244 107 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU4-18P-201ENST00000516751 149 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 HIF1AP1-201ENST00000553642 175 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 AC007671.2-201ENST00000637344 619 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 SNORA63.6-201ENST00000364921 119 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU6-649P-201ENST00000384463 107 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 RNU2-62P-201ENST00000410868 191 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 AC018865.2-201ENST00000423631 129 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 AL009048.1-201ENST00000450437 298 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 MIR548AG1-201ENST00000579932 66 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 AC078880.5-201ENST00000617845 421 ntBASIC-1.74□□□□□ -2.69
COL6A5A8TX70 AC073343.1-201ENST00000328239 651 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 RNU6-478P-201ENST00000363904 110 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 SNORD14E-201ENST00000364009 85 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms