Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SNORD116-8-201ENST00000384365 95 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 SNORD116-7-201ENST00000384404 95 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 SNORD116-5-201ENST00000384462 95 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 AC018880.2-201ENST00000414265 201 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 MIR4500-201ENST00000579472 76 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 Y_RNA.804-201ENST00000615262 101 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 AC022140.2-201ENST00000623500 188 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 Y_RNA.5-201ENST00000362334 102 ntBASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 RNU7-175P-201ENST00000515915 61 ntBASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 RNU6-693P-201ENST00000516134 107 ntBASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 RNU7-115P-201ENST00000516433 55 ntBASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 AC108081.1-201ENST00000604358 221 ntBASIC-3.53□□□□□ -2.97
LINC01549A6NIU2 RNY1P16-201ENST00000363063 111 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 RNU6-74P-201ENST00000384235 107 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.461-201ENST00000384263 103 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 SNORA53-201ENST00000391141 249 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 MTND3P7-201ENST00000474435 343 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 SEPT14P4-201ENST00000513445 186 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 MIR4490-201ENST00000582647 84 ntBASIC-3.54□□□□□ -2.98
LINC01549A6NIU2 RNU6-522P-201ENST00000364497 107 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.340-201ENST00000365330 92 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 MIR496-201ENST00000385226 102 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 EIF1P2-201ENST00000428233 350 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 RNU7-149P-201ENST00000516739 59 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 AC018638.8-201ENST00000588755 281 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 AC006566.1-201ENST00000608943 513 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 AC006927.2-201ENST00000639256 389 ntBASIC-3.55□□□□□ -2.98
LINC01549A6NIU2 RNU4-80P-201ENST00000363200 141 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 SNORD114-10-201ENST00000363409 72 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 RNU6-1258P-201ENST00000516911 111 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 RNU6-980P-201ENST00000516925 103 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 RNU6-762P-201ENST00000517107 102 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 AC004467.1-201ENST00000615678 330 ntBASIC-3.56□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 RNU6-533P-201ENST00000384144 107 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 RNU6-80P-201ENST00000384195 107 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 RNU6-21P-201ENST00000384710 107 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 MTCO2P30-201ENST00000503662 364 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 AC116353.3-201ENST00000511215 249 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 SNORA40.9-201ENST00000515895 93 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-3.57□□□□□ -2.98
LINC01549A6NIU2 RNU6-79P-201ENST00000362511 107 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 RNU6-1290P-201ENST00000362957 109 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 RNA5SP405-201ENST00000363059 114 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.351-201ENST00000365436 96 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 RNU6-1189P-201ENST00000383958 107 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 CYCSP46-201ENST00000423569 204 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 AC090616.4-201ENST00000448026 115 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 SNORD67.1-201ENST00000516618 108 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 AC005771.1-201ENST00000585581 349 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 AL080274.1-201ENST00000605565 220 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 AC084781.2-201ENST00000615568 161 ntBASIC-3.58□□□□□ -2.98
LINC01549A6NIU2 RNU6-1163P-201ENST00000364516 107 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 SNORA63.6-201ENST00000364921 119 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.310-201ENST00000365063 113 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.342-201ENST00000365352 113 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 MIR181A1-201ENST00000385026 110 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 RNU7-106P-201ENST00000459514 67 ntBASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-3.59□□□□□ -2.98
LINC01549A6NIU2 Y_RNA.54-201ENST00000362766 105 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 RNU6-961P-201ENST00000363893 105 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.207-201ENST00000364142 106 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 MTATP6P19-201ENST00000413797 659 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 RNU6-893P-201ENST00000458841 100 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 AC144568.1-201ENST00000520139 137 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 AC021613.1-201ENST00000623880 111 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 AC007494.3-201ENST00000624660 743 ntBASIC-3.6□□□□□ -2.99
LINC01549A6NIU2 RNU6-553P-201ENST00000364047 96 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 RNU6-128P-201ENST00000383976 107 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.454-201ENST00000384224 113 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 RNU6-710P-201ENST00000410424 105 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.608-201ENST00000410647 95 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 ELOCP20-201ENST00000422460 345 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 AF228730.3-201ENST00000436691 102 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 RNU7-80P-201ENST00000459562 61 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 AC104010.1-201ENST00000616889 150 ntBASIC-3.61□□□□□ -2.99
LINC01549A6NIU2 RNU6-194P-201ENST00000363862 105 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.341-201ENST00000365341 102 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 RNU6-695P-201ENST00000391157 104 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.596-201ENST00000410462 109 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 MTATP6P24-201ENST00000576835 677 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 MIR3139-201ENST00000579145 76 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 AC091932.4-201ENST00000623386 200 ntBASIC-3.62□□□□□ -2.99
LINC01549A6NIU2 RNU6-841P-201ENST00000383872 107 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 RNU6-413P-201ENST00000384115 107 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 RNU6-102P-201ENST00000384485 104 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.577-201ENST00000384794 101 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 RNU2-66P-201ENST00000410650 161 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.631-201ENST00000459607 101 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 FGF7P4-201ENST00000509595 295 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 RNU6-436P-201ENST00000516171 114 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms