Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-455P-201ENST00000384681 107 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 MTATP6P23-201ENST00000440153 476 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 SNORD57-201ENST00000448188 72 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 AC015540.1-201ENST00000615828 501 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 PISRT1.1-201ENST00000616930 107 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR302B-201ENST00000362188 73 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU4-58P-201ENST00000363192 141 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU4-80P-201ENST00000363200 141 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 RNY3P5-201ENST00000384127 102 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR635-201ENST00000384830 98 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 AL445193.1-201ENST00000441183 141 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-126P-201ENST00000516685 103 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR4760-201ENST00000585040 80 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR6841-201ENST00000637129 72 ntBASIC-0.74□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 RNY1P2-201ENST00000364820 117 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR9-2-201ENST00000384838 87 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-175P-201ENST00000516896 107 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 AC100767.1-201ENST00000528178 123 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 AP003733.2-201ENST00000529409 171 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 U2.1-201ENST00000618978 145 ntBASIC-0.75□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 SNORD63-201ENST00000384262 68 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 AC107399.1-201ENST00000451226 265 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-365P-201ENST00000517113 106 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR3974-201ENST00000637126 96 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 AC093726.3-201ENST00000637588 150 ntBASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.76□□□□□ -2.53
TRAV1-1A0A0B4J248 SNORA22.1-201ENST00000362701 134 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-509P-201ENST00000363519 107 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-47P-201ENST00000383866 107 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 SNORD56B-201ENST00000384713 71 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-510P-201ENST00000391239 108 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 MTCO2P24-201ENST00000515611 426 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-397P-201ENST00000516226 104 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-264P-201ENST00000517134 104 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR548AE1-201ENST00000583292 70 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 AC091932.4-201ENST00000623386 200 ntBASIC-0.77□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR539-201ENST00000365690 78 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-763P-201ENST00000390865 106 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 AC096644.2-201ENST00000429278 159 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 TRAJ51-201ENST00000504127 63 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-506P-201ENST00000516553 94 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 MIR3920-201ENST00000581751 86 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-86P-201ENST00000606534 107 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 AL669831.3-213ENST00000636676 183 ntBASIC-0.78□□□□□ -2.53
TRAV1-1A0A0B4J248 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU1-141P-201ENST00000364623 158 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR181B2-201ENST00000385004 89 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR181A1-201ENST00000385026 110 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR599-201ENST00000385069 95 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU2-16P-201ENST00000410712 136 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU7-79P-201ENST00000516082 62 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU7-110P-201ENST00000516891 62 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 RNY1P9-201ENST00000532431 109 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 AC078883.4-201ENST00000623218 367 ntBASIC-0.79□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 MTND3P8-201ENST00000412909 339 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 MTND1P14-201ENST00000427400 950 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 MTND1P34-201ENST00000438556 671 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU7-80P-201ENST00000459562 61 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms