Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 Y_RNA.328-201ENST00000365208 113 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-360P-201ENST00000390944 104 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 AL513534.2-201ENST00000603836 250 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 AC243994.1-201ENST00000618627 109 ntBASIC2.39□□□□□ -2.03
SNCAIPQ9Y6H5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1113P-201ENST00000384348 107 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 MIR17-201ENST00000385012 84 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-747P-201ENST00000390928 104 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-241P-201ENST00000391148 104 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA17.3-201ENST00000391159 129 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNY4P30-201ENST00000410216 95 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-177P-201ENST00000411257 104 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 POLR2J4-204ENST00000418424 324 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 Y_RNA.694-201ENST00000516677 117 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 MIR4498-201ENST00000577599 66 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 MIR4287-201ENST00000579398 78 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 MIR4791-201ENST00000607666 84 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNCAIPQ9Y6H5 AC005336.3-201ENST00000623833 2679 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 AC108667.1-201ENST00000428618 249 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 RPL39P25-201ENST00000449384 154 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 RNU7-113P-201ENST00000459273 62 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.37□□□□□ -2.03
SNCAIPQ9Y6H5 RNA5SP276-201ENST00000362580 94 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA40.18-201ENST00000391200 128 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-893P-201ENST00000458841 100 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 RPS23P4-201ENST00000487908 423 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 RNU2-13P-201ENST00000515909 113 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 RNA5SP182-201ENST00000516064 82 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 AC006254.2-201ENST00000603259 279 ntBASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNCAIPQ9Y6H5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-203P-201ENST00000384038 104 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA51.10-201ENST00000384418 136 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 RNA5SP261-201ENST00000410536 106 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 MIR5582-201ENST00000579697 68 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 AL162726.3-218ENST00000636401 95 ntBASIC2.35□□□□□ -2.03
SNCAIPQ9Y6H5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA22.1-201ENST00000362701 134 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA24-201ENST00000384096 131 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-913P-201ENST00000390913 95 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-816P-201ENST00000390914 107 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 RNA5SP233-201ENST00000459153 113 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 MIR514B-201ENST00000516774 80 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 SNORA74.3-201ENST00000517108 154 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 AC087741.2-201ENST00000619415 172 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 MIR6717-201ENST00000622747 73 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 AC095038.3-201ENST00000634439 195 ntBASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNCAIPQ9Y6H5 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
SNCAIPQ9Y6H5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.34□□□□□ -2.04
SNCAIPQ9Y6H5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 RNA5SP33-201ENST00000516687 98 ntBASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 AC141557.1-201ENST00000540982 400 ntBASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 AP001318.4-201ENST00000616637 121 ntBASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNCAIPQ9Y6H5 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 Y_RNA.299-201ENST00000364973 94 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 MIR590-201ENST00000385008 97 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 SNORA26.6-201ENST00000391256 115 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 MIR1912-201ENST00000410389 80 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 SNORA19.1-201ENST00000410656 129 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 RNU4-69P-201ENST00000410677 143 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 AC003989.2-201ENST00000440224 169 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 RNU7-73P-201ENST00000458743 63 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 AC108729.3-201ENST00000513484 108 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 SNRPGP19-201ENST00000603826 189 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 AL020996.3-201ENST00000606617 222 ntBASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNCAIPQ9Y6H5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 Y_RNA.348-201ENST00000365403 103 ntBASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 RNU6-905P-201ENST00000384434 107 ntBASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.31□□□□□ -2.04
SNCAIPQ9Y6H5 RNU6-917P-201ENST00000516294 104 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms