Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 U8.2-201ENST00000363156 134 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.298-201ENST00000364960 107 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 RNA5SP126-201ENST00000365092 109 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.353-201ENST00000365440 108 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 RNA5SP144-201ENST00000410846 116 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 RPL39P39-201ENST00000455840 151 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 RNU7-164P-201ENST00000459221 62 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 MIR4648-201ENST00000580107 72 ntBASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PCDHA9Q9Y5H5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 MTND5P18-201ENST00000445624 1801 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 RNU4-16P-201ENST00000364737 141 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.528-201ENST00000384575 108 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6-735P-201ENST00000410612 107 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 RNU7-45P-201ENST00000459460 63 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 MIR3937-201ENST00000580135 106 ntBASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.85□□□□□ -2.11
PCDHA9Q9Y5H5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 AL022718.1-201ENST00000412004 84 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 POLR2J4-204ENST00000418424 324 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 MIR3664-201ENST00000579074 99 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 MIR3192-201ENST00000584920 77 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 AL096861.1-201ENST00000610899 123 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 MIR6841-201ENST00000637129 72 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 Z97988.1-201ENST00000637697 135 ntBASIC1.84□□□□□ -2.11
PCDHA9Q9Y5H5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
PCDHA9Q9Y5H5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.198-201ENST00000364013 98 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 SNORA1.1-201ENST00000364671 133 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-1056P-201ENST00000383996 107 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 SNORA70B-201ENST00000384210 135 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 RPS3AP1-201ENST00000413190 320 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 AL133373.1-201ENST00000497098 94 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 RNU2-35P-201ENST00000516446 142 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
PCDHA9Q9Y5H5 AP000648.3-201ENST00000623539 4507 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-1064P-201ENST00000410626 104 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 RNU7-123P-201ENST00000515911 60 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 MIR548AO-201ENST00000579992 96 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 AL670379.3-201ENST00000605040 251 ntBASIC1.82□□□□□ -2.12
PCDHA9Q9Y5H5 SNORA22.1-201ENST00000362701 134 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-1144P-201ENST00000384247 104 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 MIR759-201ENST00000390224 91 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 AC009474.2-201ENST00000451383 136 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 RNU1-41P-201ENST00000516161 162 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 RNU1-48P-201ENST00000516400 162 ntBASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.213-201ENST00000364178 111 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.531-201ENST00000384589 121 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-476P-201ENST00000384726 107 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 MIR548A3-201ENST00000385297 97 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-1190P-201ENST00000410811 104 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 SNORD33.1-201ENST00000516213 88 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 AL121890.5-201ENST00000620848 304 ntBASIC1.8□□□□□ -2.12
PCDHA9Q9Y5H5 SNORD115-2-201ENST00000362842 82 ntBASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 SNORD115-20-201ENST00000365099 82 ntBASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 HMGN1P33-201ENST00000432945 451 ntBASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 AC004812.1-201ENST00000540773 146 ntBASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 CYP3A52P-201ENST00000563326 91 ntBASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHA9Q9Y5H5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.299-201ENST00000364973 94 ntBASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 Y_RNA.649-201ENST00000459077 103 ntBASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 AP003716.2-201ENST00000528260 108 ntBASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
PCDHA9Q9Y5H5 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD38B-201ENST00000384690 67 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-602P-201ENST00000411155 105 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 RPS27P16-201ENST00000425758 201 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 AL512326.2-201ENST00000426359 151 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 RNU7-113P-201ENST00000459273 62 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 AC113410.1-201ENST00000505029 247 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 RNU11-2P-201ENST00000516898 142 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD38B-202ENST00000625943 69 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 265.7 ms