Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-355P-201ENST00000410427 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-791P-201ENST00000410467 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-705P-201ENST00000410601 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-1100P-201ENST00000410691 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU2-40P-201ENST00000410833 196 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-860P-201ENST00000410860 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-1217P-201ENST00000411276 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-785P-201ENST00000411324 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RPS29P28-201ENST00000446439 141 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 U6.90-201ENST00000614007 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 U6.70-201ENST00000620287 104 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PCDHGA11Q9Y5H2 RNY1P10-201ENST00000363268 113 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-865P-201ENST00000364772 107 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 Y_RNA.467-201ENST00000384297 102 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 SNORD116-22-201ENST00000384430 92 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 RNU6-813P-201ENST00000384691 107 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR491-201ENST00000384877 84 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 BTF3P4-201ENST00000418852 495 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
PCDHGA11Q9Y5H2 SNORD114-10-201ENST00000363409 72 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 RNA5SP259-201ENST00000365541 109 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 AC090844.1-201ENST00000422019 156 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 AC109327.2-201ENST00000448339 378 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR548AO-201ENST00000579992 96 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR376B-201ENST00000614515 100 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR1245B-201ENST00000636115 69 ntBASIC2.6□□□□□ -1.99
PCDHGA11Q9Y5H2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 SNORD116-10-201ENST00000363791 102 ntBASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 MIR9-1-201ENST00000385198 89 ntBASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 AL445685.2-201ENST00000422551 342 ntBASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA11Q9Y5H2 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.190-201ENST00000363964 101 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.219-201ENST00000364232 113 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 SNORD38.2-201ENST00000384470 69 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 MIR513A1-201ENST00000385138 129 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 RPL31P63-201ENST00000422565 375 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 JTBP1-201ENST00000441314 247 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 AC055731.1-201ENST00000474387 401 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 UBL5P1-201ENST00000507979 193 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 SNORD67.1-201ENST00000516618 108 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 AC245884.12-201ENST00000615364 59 ntBASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA11Q9Y5H2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.98-201ENST00000363109 102 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNA5SP48-201ENST00000363969 126 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-242P-201ENST00000384359 107 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 SNORA11.1-201ENST00000408133 129 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNA5SP237-201ENST00000410414 113 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-592P-201ENST00000411333 103 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.685-201ENST00000516532 108 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA11Q9Y5H2 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-1237P-201ENST00000384777 107 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 U8.15-201ENST00000390947 134 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 RNU7-41P-201ENST00000515917 61 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 ELOCP29-201ENST00000588193 334 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 AL357312.1-201ENST00000603879 298 ntBASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA11Q9Y5H2 SNORD58A-201ENST00000383875 65 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 MIR128-1-201ENST00000384921 82 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 RPL23AP83-201ENST00000434984 473 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-1006P-201ENST00000516998 103 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-90P-201ENST00000606352 106 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-86P-201ENST00000606534 107 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 AL137790.1-201ENST00000634283 177 ntBASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PCDHGA11Q9Y5H2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 Y_RNA.247-201ENST00000364500 92 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 MIR34C-201ENST00000384831 77 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 MIR23A-201ENST00000385245 73 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 AL161935.2-201ENST00000414627 60 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms