Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-414P-201ENST00000363705 104 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 MIR548D2-201ENST00000384955 97 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-913P-201ENST00000390913 95 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 AL022718.1-201ENST00000412004 84 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 AL512326.2-201ENST00000426359 151 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 RNU7-45P-201ENST00000459460 63 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 MIR3152-201ENST00000579801 74 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-554P-201ENST00000410466 106 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 RNA5SP261-201ENST00000410536 106 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 RPL39P34-201ENST00000477141 156 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 RPS23P4-201ENST00000487908 423 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 MIR8055-201ENST00000610739 97 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 uc_338.28-201ENST00000612082 187 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 MIR6717-201ENST00000622747 73 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 AL589743.1-201ENST00000551932 2712 ntBASIC1.91□□□□□ -2.1
CDC42EP3Q9UKI2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-1014P-201ENST00000383940 103 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 AL031737.1-201ENST00000450125 223 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 snoU13.16-201ENST00000459350 104 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 AC106754.2-201ENST00000623006 233 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA63.5-201ENST00000363548 123 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 MIR1287-201ENST00000408492 90 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 MIR5007-201ENST00000583098 95 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 AC087741.2-201ENST00000619415 172 ntBASIC1.89□□□□□ -2.11
CDC42EP3Q9UKI2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-1298P-201ENST00000362456 101 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA22.1-201ENST00000362701 134 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.163-201ENST00000363702 113 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA51.10-201ENST00000384418 136 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 AC008133.2-201ENST00000624540 351 ntBASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDC42EP3Q9UKI2 SNORD115-19-201ENST00000363098 82 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 SNORD115-18-201ENST00000363293 82 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 SNORD115-17-201ENST00000364612 82 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 U8.6-201ENST00000364939 135 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 MIR513A1-201ENST00000385138 129 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 AC113410.1-201ENST00000505029 247 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-322P-201ENST00000516010 103 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-168P-201ENST00000516189 101 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-295P-201ENST00000516901 104 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 AC068339.1-201ENST00000526965 141 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 AC015688.6-201ENST00000577737 104 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 MIR5009-201ENST00000578736 100 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC42EP3Q9UKI2 MIR21-201ENST00000362134 72 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 MIR450A1-201ENST00000362262 91 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-766P-201ENST00000362478 107 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 MIR520C-201ENST00000385005 87 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNA5SP89-201ENST00000410300 108 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNU4-69P-201ENST00000410677 143 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNU7-113P-201ENST00000459273 62 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 RNU7-6P-201ENST00000516845 62 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 AL513534.2-201ENST00000603836 250 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 AC067747.1-201ENST00000608026 250 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 AL162726.3-218ENST00000636401 95 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 Z97988.1-201ENST00000637697 135 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.328-201ENST00000365208 113 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-32P-201ENST00000383948 107 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-13P-201ENST00000384248 107 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.495-201ENST00000384435 112 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-12P-201ENST00000384604 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms