Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 RNU6-1131P-201ENST00000364955 107 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 RNU6-294P-201ENST00000364999 102 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 AC022254.1-201ENST00000567857 235 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 MIR4251-201ENST00000635819 61 ntBASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
FOXD3Q9UJU5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP276-201ENST00000362580 94 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP48-201ENST00000363969 126 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP259-201ENST00000365541 109 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 Y_RNA.558-201ENST00000384685 113 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 AC096949.1-201ENST00000412047 152 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 AC244636.1-201ENST00000421152 228 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 AC245047.7-201ENST00000440265 293 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 AL773524.1-201ENST00000614065 229 ntBASIC2.37□□□□□ -2.03
FOXD3Q9UJU5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 SNORA32-201ENST00000384072 121 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 MIR605-201ENST00000385078 83 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 RNU6-679P-201ENST00000391003 106 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 SNORA7.5-201ENST00000410672 110 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 RNU6-602P-201ENST00000411155 105 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 AL353813.1-201ENST00000440700 253 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 RNU7-35P-201ENST00000517174 62 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 AL357312.1-201ENST00000603879 298 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 AL590808.1-201ENST00000618696 141 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXD3Q9UJU5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 Y_RNA.96-201ENST00000363092 109 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 MIR488-201ENST00000365739 83 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 RNU6-49P-201ENST00000384256 107 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 SNORD111.1-201ENST00000516421 86 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 RNU6-521P-201ENST00000516663 105 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 MIR4635-201ENST00000583759 79 ntBASIC2.35□□□□□ -2.03
FOXD3Q9UJU5 RNU6-1313P-201ENST00000362622 102 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 SNORD45B-201ENST00000364617 72 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 RNU6-1201P-201ENST00000384227 107 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 SNORA18-201ENST00000384416 132 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 MIR548AO-201ENST00000579992 96 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 MIR4713-201ENST00000582691 75 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 MALAT1.1-201ENST00000618249 95 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.34□□□□□ -2.03
FOXD3Q9UJU5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 RNA5SP432-201ENST00000362480 116 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 SNORD115-35-201ENST00000365122 82 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 SNORD38B-201ENST00000384690 67 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 RNU7-41P-201ENST00000515917 61 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 SNORD38B-202ENST00000625943 69 ntBASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
FOXD3Q9UJU5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 RNU6-342P-201ENST00000384521 104 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 RNU6-1086P-201ENST00000410930 100 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 AC004941.2-201ENST00000427009 228 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 RNU7-2P-201ENST00000516096 62 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 AC015688.6-201ENST00000577737 104 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 AC096720.1-201ENST00000604441 183 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 AL442128.1-201ENST00000615151 90 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
FOXD3Q9UJU5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 RNU6-170P-201ENST00000362832 104 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 SNORA16B-201ENST00000364674 135 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 Y_RNA.342-201ENST00000365352 113 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 RNU6-439P-201ENST00000384188 106 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 SNORD41-201ENST00000386967 70 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 RNU6-250P-201ENST00000516958 103 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 RNU6-844P-201ENST00000517175 102 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 AL512310.12-203ENST00000640543 90 ntBASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXD3Q9UJU5 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 SNORA77B-201ENST00000578179 125 ntBASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 MIR8074-201ENST00000615081 81 ntBASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXD3Q9UJU5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 AC009474.2-201ENST00000451383 136 ntBASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 AC108729.3-201ENST00000513484 108 ntBASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms