Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DEFB108C-201ENST00000400154 252 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 AL160004.2-201ENST00000432935 350 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 AC021146.6-201ENST00000514659 117 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 RNU6-138P-201ENST00000515952 107 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 AC006362.1-201ENST00000567392 174 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 AL049861.1-201ENST00000603130 150 ntBASIC-1.15□□□□□ -2.59
VPS29Q9UBQ0 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 MIR626-201ENST00000385032 94 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 IGKV1-22-201ENST00000524313 326 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 MIR1321-201ENST00000637766 79 ntBASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.16□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 RNU6-509P-201ENST00000363519 107 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 SNORD61-201ENST00000384252 73 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 MIR196A1-201ENST00000388006 70 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 MTND2P9-201ENST00000422293 931 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 SNORD77.4-201ENST00000516158 81 ntBASIC-1.17□□□□□ -2.6
VPS29Q9UBQ0 RNU6-888P-201ENST00000363010 101 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 RNY1P13-201ENST00000365030 105 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 MTND3P10-201ENST00000450967 341 ntBASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.18□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 AF228730.3-201ENST00000436691 102 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 RNU6-881P-201ENST00000516813 102 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 MIR4473-201ENST00000583731 91 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 AC090582.1-201ENST00000636321 199 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 TPTEP1-208ENST00000636884 213 ntBASIC-1.19□□□□□ -2.6
VPS29Q9UBQ0 RNU6-801P-201ENST00000364087 105 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 MIR9-2-201ENST00000384838 87 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 RNU6-308P-201ENST00000390957 107 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 RPS3AP52-201ENST00000435639 297 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 AC100767.1-201ENST00000528178 123 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 PISRT1.1-201ENST00000616930 107 ntBASIC-1.2□□□□□ -2.6
VPS29Q9UBQ0 RNA5SP133-201ENST00000363368 119 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 SNORA18-201ENST00000384416 132 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 MIR181B2-201ENST00000385004 89 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 RNU7-4P-201ENST00000516961 62 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 U6.92-201ENST00000636464 89 ntBASIC-1.21□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU6-899P-201ENST00000363947 107 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU6-144P-201ENST00000383951 107 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 SNORA20-201ENST00000384662 132 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 MIR635-201ENST00000384830 98 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 MIR548F5-201ENST00000408421 86 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU6-383P-201ENST00000410864 94 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU6-365P-201ENST00000517113 106 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 AC144568.1-201ENST00000520139 137 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 AC099654.14-201ENST00000638599 341 ntBASIC-1.22□□□□□ -2.6
VPS29Q9UBQ0 RNU2-66P-201ENST00000410650 161 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 MTATP6P23-201ENST00000440153 476 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 RNU7-169P-201ENST00000459456 61 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 RNU6-415P-201ENST00000516252 97 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 RNU6-126P-201ENST00000516685 103 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 AC145350.1-201ENST00000567426 208 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 MIR6841-201ENST00000637129 72 ntBASIC-1.23□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 RNU6-901P-201ENST00000384593 106 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 SNORD56B-201ENST00000384713 71 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 MIR628-201ENST00000385229 95 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 MIR548K-201ENST00000408406 116 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 RNU7-110P-201ENST00000516891 62 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 RNU6-175P-201ENST00000516896 107 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 MIR4280-201ENST00000582178 76 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 uc_338.10-201ENST00000621872 182 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 U6.109-201ENST00000636749 87 ntBASIC-1.24□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 SNORA22.1-201ENST00000362701 134 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms