Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP482-201ENST00000391269 118 ntBASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 AC004812.1-201ENST00000540773 146 ntBASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 SNORD115-3-201ENST00000363100 82 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 SNORD115-27-201ENST00000364430 82 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 RN7SKP200-201ENST00000410564 320 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 STAG3L5P-204ENST00000443759 179 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 AC087499.4-201ENST00000448505 178 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 HMGN2P23-201ENST00000456759 269 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 AC078899.2-201ENST00000595282 212 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMCD1Q9NZU5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 RNU6-163P-201ENST00000384396 106 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.494-201ENST00000384432 111 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 AC092427.1-202ENST00000430569 476 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 MIR1270-201ENST00000459320 83 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 RPL23AP63-201ENST00000498752 471 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 MIR4439-201ENST00000583746 80 ntBASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMCD1Q9NZU5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 RNU6-1313P-201ENST00000362622 102 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 SNORA27-201ENST00000384323 126 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.545-201ENST00000384652 105 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 AC079804.2-201ENST00000490376 200 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.59□□□□□ -1.99
LMCD1Q9NZU5 RNU6-23P-201ENST00000363283 107 ntBASIC2.58□□□□□ -2
LMCD1Q9NZU5 RNU6-524P-201ENST00000384270 107 ntBASIC2.58□□□□□ -2
LMCD1Q9NZU5 AL627390.1-201ENST00000396055 340 ntBASIC2.58□□□□□ -2
LMCD1Q9NZU5 AC090255.1-201ENST00000495779 349 ntBASIC2.58□□□□□ -2
LMCD1Q9NZU5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.58□□□□□ -2
LMCD1Q9NZU5 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
LMCD1Q9NZU5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LMCD1Q9NZU5 Y_RNA.609-201ENST00000410669 89 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 POLR2J4-204ENST00000418424 324 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 AL035398.1-201ENST00000430869 322 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 RNU7-28P-201ENST00000516759 62 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
LMCD1Q9NZU5 MIR3169-201ENST00000578032 83 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 MIR5694-201ENST00000581190 76 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 AC103810.7-201ENST00000607821 91 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 MIR8054-201ENST00000620877 86 ntBASIC2.57□□□□□ -2
LMCD1Q9NZU5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
LMCD1Q9NZU5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LMCD1Q9NZU5 Y_RNA.247-201ENST00000364500 92 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 SNORA1.1-201ENST00000364671 133 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 AL022718.1-201ENST00000412004 84 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.56□□□□□ -2
LMCD1Q9NZU5 RNU7-45P-201ENST00000459460 63 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 RNU7-181P-201ENST00000517234 74 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 MIR376B-201ENST00000614515 100 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 Y_RNA.788-201ENST00000622394 112 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 MIR6873-201ENST00000622788 63 ntBASIC2.56□□□□□ -2
LMCD1Q9NZU5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.56□□□□□ -2
LMCD1Q9NZU5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LMCD1Q9NZU5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
LMCD1Q9NZU5 AC090844.1-201ENST00000422019 156 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
LMCD1Q9NZU5 RNU6-539P-201ENST00000516665 103 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 U7.4-201ENST00000614961 63 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 AC021613.1-201ENST00000623880 111 ntBASIC2.55□□□□□ -2
LMCD1Q9NZU5 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
LMCD1Q9NZU5 Y_RNA.299-201ENST00000364973 94 ntBASIC2.54□□□□□ -2
LMCD1Q9NZU5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.54□□□□□ -2
LMCD1Q9NZU5 AC069257.2-201ENST00000441819 155 ntBASIC2.54□□□□□ -2
LMCD1Q9NZU5 SEPT14P17-201ENST00000617978 177 ntBASIC2.54□□□□□ -2
LMCD1Q9NZU5 AP000648.3-201ENST00000623539 4507 ntBASIC2.54□□□□□ -2
LMCD1Q9NZU5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LMCD1Q9NZU5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.53□□□□□ -2
LMCD1Q9NZU5 MIRLET7C-201ENST00000362160 84 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 RNU6-1163P-201ENST00000364516 107 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 Y_RNA.338-201ENST00000365320 114 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC015922.2-201ENST00000435593 184 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC108729.3-201ENST00000513484 108 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 RNU6-998P-201ENST00000515894 101 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 SNORA31.10-201ENST00000516482 106 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC090821.2-201ENST00000523552 176 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC140658.3-201ENST00000567603 271 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 264.7 ms