Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SNRPGP8-201ENST00000454064 226 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 RNU7-80P-201ENST00000459562 61 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 MIR4282-201ENST00000583613 67 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 MIR8062-201ENST00000621515 85 ntBASIC0.62□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 MT-TF-201ENST00000387314 71 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-602P-201ENST00000411155 105 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 snoU13.2-201ENST00000459201 104 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.61□□□□□ -2.31
BLOC1S4Q9NUP1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-103P-201ENST00000363686 107 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 RNU6-728P-201ENST00000365375 104 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 RNU4-17P-201ENST00000365598 141 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 MIR1257-201ENST00000408490 117 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 MIR6740-201ENST00000618268 113 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 AL365265.1-201ENST00000621045 234 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 AC010332.2-201ENST00000613083 1904 ntBASIC0.6□□□□□ -2.31
BLOC1S4Q9NUP1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
BLOC1S4Q9NUP1 MT-TT-201ENST00000387460 66 ntBASIC0.59□□□□□ -2.31
BLOC1S4Q9NUP1 SNORA4-201ENST00000584302 138 ntBASIC0.59□□□□□ -2.31
BLOC1S4Q9NUP1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-42P-201ENST00000384165 107 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 MIR518E-201ENST00000385252 88 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-747P-201ENST00000390928 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-241P-201ENST00000391148 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-447P-201ENST00000410293 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-355P-201ENST00000410427 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-791P-201ENST00000410467 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-705P-201ENST00000410601 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-860P-201ENST00000410860 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-785P-201ENST00000411324 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 HMGN1P33-201ENST00000432945 451 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 AL138752.1-201ENST00000452964 351 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU7-56P-201ENST00000458744 62 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 U6.90-201ENST00000614007 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 U6.70-201ENST00000620287 104 ntBASIC0.58□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-238P-201ENST00000363313 106 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 SNORA63-201ENST00000363450 132 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 MIR125B2-201ENST00000385128 89 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-381P-201ENST00000391259 108 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 AP003072.1-201ENST00000531740 145 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 MIR3152-201ENST00000579801 74 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 AC020891.4-201ENST00000605745 93 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
BLOC1S4Q9NUP1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 MIR342-201ENST00000362212 99 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 MIR563-201ENST00000385080 79 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.56□□□□□ -2.32
BLOC1S4Q9NUP1 RNU4-43P-201ENST00000410628 137 ntBASIC0.55□□□□□ -2.32
BLOC1S4Q9NUP1 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
BLOC1S4Q9NUP1 RNU7-185P-201ENST00000459215 60 ntBASIC0.55□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-453P-201ENST00000516819 85 ntBASIC0.55□□□□□ -2.32
BLOC1S4Q9NUP1 MIR5197-201ENST00000583721 112 ntBASIC0.55□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-653P-201ENST00000363074 106 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-342P-201ENST00000384521 104 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 RNU6-651P-201ENST00000411040 105 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 396.7 ms