Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL512427.1-201ENST00000618593 349 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 MRPL42P2-201ENST00000403169 426 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 AL354751.2-201ENST00000415471 210 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 AL035461.1-201ENST00000421490 332 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 RNU6-720P-201ENST00000516363 108 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 MIR548AM-201ENST00000584298 74 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 HULC.1-201ENST00000612720 240 ntBASIC-1.03□□□□□ -2.57
CHD8Q9HCK8 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNY4P9-201ENST00000363194 97 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNA5SP133-201ENST00000363368 119 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNU6-268P-201ENST00000364174 107 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNU6-454P-201ENST00000364292 107 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 MIR582-201ENST00000365731 98 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNU6-746P-201ENST00000384112 109 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 SNORD116-12-201ENST00000384468 92 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 PMCHL1-202ENST00000423102 261 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 AC023449.1-201ENST00000454464 154 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 TPTE2P5-203ENST00000458118 728 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 AC116353.3-201ENST00000511215 249 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNU6-693P-201ENST00000516134 107 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 U4.1-201ENST00000620349 87 ntBASIC-1.03□□□□□ -2.58
CHD8Q9HCK8 RNY1P2-201ENST00000364820 117 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 MIR539-201ENST00000365690 78 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 SNORA18-201ENST00000384416 132 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-201P-201ENST00000517100 61 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 MIR5693-201ENST00000577722 73 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 MIR4308-201ENST00000580634 81 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 AC080013.3-201ENST00000606839 578 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-208P-201ENST00000362431 107 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-436P-201ENST00000516171 114 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-531P-201ENST00000516694 104 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-334P-201ENST00000517072 102 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 SCOCP1-201ENST00000554676 349 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 YWHAEP2-201ENST00000580066 112 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 AC109347.2-201ENST00000610220 349 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 AC072046.2-201ENST00000618366 268 ntBASIC-1.04□□□□□ -2.58
CHD8Q9HCK8 RNU4-58P-201ENST00000363192 141 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU6-571P-201ENST00000384128 107 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 SNORD77.3-201ENST00000391113 65 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU6-998P-201ENST00000515894 101 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU1-54P-201ENST00000517181 120 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 AC068339.1-201ENST00000526965 141 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 AC092807.2-201ENST00000609367 243 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 AC012531.4-201ENST00000616509 177 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNY1P12-201ENST00000364251 105 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU4-10P-201ENST00000364383 140 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU6-476P-201ENST00000384726 107 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNU2-14P-201ENST00000411053 191 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 MTND2P3-201ENST00000452458 470 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.05□□□□□ -2.58
CHD8Q9HCK8 RNY1P16-201ENST00000363063 111 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 AC018880.2-201ENST00000414265 201 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 AC022878.1-201ENST00000530684 149 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 RNU7-10P-201ENST00000607194 63 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 U2.17-201ENST00000611454 95 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 FTX_4.1-201ENST00000616291 147 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 RNU6-280P-201ENST00000364145 104 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 RNU6-913P-201ENST00000390913 95 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 MTCYBP36-201ENST00000404146 440 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 AC084290.1-201ENST00000434995 374 ntBASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.06□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 RNU6-550P-201ENST00000391057 101 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AL031003.1-201ENST00000404229 172 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AC097635.1-201ENST00000450678 155 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 SERF1AP1-201ENST00000514575 187 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 SNORA19.2-201ENST00000516013 114 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 MTATP6P15-201ENST00000527233 835 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AL365203.2-201ENST00000423444 196 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 RNU7-141P-201ENST00000459304 62 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AC112204.1-201ENST00000502591 103 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 CPDP1-201ENST00000579660 283 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 MIR5583-1-201ENST00000580941 59 ntBASIC-1.07□□□□□ -2.58
CHD8Q9HCK8 MIR3123-201ENST00000583417 75 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms