Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBQLN3Q9H347 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBQLN3Q9H347 MIR342-201ENST00000362212 99 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.66-201ENST00000362862 102 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.562-201ENST00000384695 113 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 RNU6-913P-201ENST00000390913 95 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 RNU6-1228P-201ENST00000391014 107 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 MIR1302-3-201ENST00000408128 138 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.668-201ENST00000516233 93 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 RNA5SP153-201ENST00000516498 76 ntBASIC0.7□□□□□ -2.3
UBQLN3Q9H347 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBQLN3Q9H347 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.7-201ENST00000362352 102 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 RNU6-653P-201ENST00000363074 106 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 SNORD27-201ENST00000363981 72 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 RNU6-934P-201ENST00000365154 107 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 RNU6-1189P-201ENST00000383958 107 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.477-201ENST00000384352 108 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 SNORD38B-201ENST00000384690 67 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 MIR548H3-201ENST00000408771 118 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 SNORD83.1-201ENST00000411362 77 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN3Q9H347 MTND3P2-201ENST00000438452 342 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 RNU7-73P-201ENST00000458743 63 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 MTND1P19-201ENST00000511780 315 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN3Q9H347 AC011921.3-201ENST00000605540 361 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 AL442067.1-201ENST00000613261 223 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 MIR6734-201ENST00000621166 68 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 SNORD38B-202ENST00000625943 69 ntBASIC0.69□□□□□ -2.3
UBQLN3Q9H347 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.262-201ENST00000364641 102 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.292-201ENST00000364904 97 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNU6-580P-201ENST00000365159 107 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.354-201ENST00000365448 111 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNU6-574P-201ENST00000384265 107 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.556-201ENST00000384677 113 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNU6-381P-201ENST00000391259 108 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 AC244023.1-201ENST00000426884 112 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 AC015818.7-201ENST00000428754 109 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 HMGN1P33-201ENST00000432945 451 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 AC087499.7-201ENST00000441958 109 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNU7-62P-201ENST00000458856 62 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.68□□□□□ -2.3
UBQLN3Q9H347 RNY3P16-201ENST00000516338 101 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 AC242498.1-201ENST00000604134 111 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
UBQLN3Q9H347 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 RNU4-17P-201ENST00000365598 141 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.410-201ENST00000383992 113 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.539-201ENST00000384635 107 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 SNORA79-201ENST00000408376 140 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 RNU2-11P-201ENST00000459191 187 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 RNU6-977P-201ENST00000516411 103 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.680-201ENST00000516441 93 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 MIR4771-2-201ENST00000577758 74 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 MIR4503-201ENST00000582187 83 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 MIR4771-1-201ENST00000582617 74 ntBASIC0.67□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.65-201ENST00000362846 100 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 Y_RNA.350-201ENST00000365409 98 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 SNORA1-201ENST00000384107 130 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 RNU6-196P-201ENST00000384315 107 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 SNORD77.3-201ENST00000391113 65 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 RNU7-96P-201ENST00000459535 64 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 RNU6-561P-201ENST00000516222 102 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 MIR3128-201ENST00000581957 66 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 AC062037.2-201ENST00000610137 73 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 MIR8055-201ENST00000610739 97 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 U4.1-201ENST00000620349 87 ntBASIC0.66□□□□□ -2.3
UBQLN3Q9H347 MIR302B-201ENST00000362188 73 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.23-201ENST00000362496 106 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.193-201ENST00000363979 102 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.308-201ENST00000365043 101 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 RNU6-728P-201ENST00000365375 104 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.440-201ENST00000384120 114 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 MIR548I3-201ENST00000408378 149 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.65□□□□□ -2.31
UBQLN3Q9H347 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 MIR3129-201ENST00000581095 76 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 Z97988.1-201ENST00000637697 135 ntBASIC0.65□□□□□ -2.31
UBQLN3Q9H347 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.20-201ENST00000362479 113 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.60-201ENST00000362831 98 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNU6-702P-201ENST00000364982 107 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNY4P28-201ENST00000365281 93 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.351-201ENST00000365436 96 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 385.9 ms