Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-902P-201ENST00000517212 91 ntBASIC1.96□□□□□ -2.1
TRIM55Q9BYV6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM55Q9BYV6 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
TRIM55Q9BYV6 MIR302B-201ENST00000362188 73 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 RNA5SP48-201ENST00000363969 126 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 RNU7-73P-201ENST00000458743 63 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.692-201ENST00000516627 105 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 MIR4285-201ENST00000581001 85 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 AL022345.2-201ENST00000606307 135 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM55Q9BYV6 AP000648.3-201ENST00000623539 4507 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 RNU6-80P-201ENST00000384195 107 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 SNORA31.4-201ENST00000516049 129 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 MIR3122-201ENST00000577243 73 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 AL121890.5-201ENST00000620848 304 ntBASIC1.94□□□□□ -2.1
TRIM55Q9BYV6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 RNU6-913P-201ENST00000390913 95 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 AL359881.1-201ENST00000602916 267 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.114-201ENST00000363265 113 ntBASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 RNY1P6-201ENST00000384193 109 ntBASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 snoU13.25-201ENST00000458945 104 ntBASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 Y_RNA.757-201ENST00000578934 114 ntBASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 MIR3121-201ENST00000579680 77 ntBASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM55Q9BYV6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RNU1-17P-201ENST00000363022 152 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RNA5SP205-201ENST00000364653 136 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 AC009474.2-201ENST00000451383 136 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RNU6-1061P-201ENST00000516530 99 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RN7SKP88-201ENST00000516847 250 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 MIR548AO-201ENST00000579992 96 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 7SK.8-201ENST00000612110 250 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 7SK.11-201ENST00000615477 250 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 7SK.13-201ENST00000622040 250 ntBASIC1.91□□□□□ -2.1
TRIM55Q9BYV6 RNU6-349P-201ENST00000362402 107 ntBASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 RNU6-659P-201ENST00000516454 104 ntBASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 RNU6-113P-201ENST00000516653 101 ntBASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 AC133485.4-201ENST00000561835 220 ntBASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 AC138907.4-201ENST00000570107 226 ntBASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM55Q9BYV6 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 Y_RNA.630-201ENST00000411370 108 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 RNU7-45P-201ENST00000459460 63 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 RNU6-772P-201ENST00000516042 105 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 CYP3A52P-201ENST00000563326 91 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 HSPE1P19-201ENST00000603327 295 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 AC108081.1-201ENST00000604358 221 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM55Q9BYV6 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 RNU4-16P-201ENST00000364737 141 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 RNU6-690P-201ENST00000365242 106 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 SNORD20-201ENST00000384550 80 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 AL158147.1-201ENST00000443970 75 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 AL133373.1-201ENST00000497098 94 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 RNU6-781P-201ENST00000516377 101 ntBASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM55Q9BYV6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 HMGN1P33-201ENST00000432945 451 ntBASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 RNU6-240P-201ENST00000516098 97 ntBASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 AC021613.1-201ENST00000623880 111 ntBASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM55Q9BYV6 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
TRIM55Q9BYV6 SNORA26.6-201ENST00000391256 115 ntBASIC1.86□□□□□ -2.11
TRIM55Q9BYV6 MIR8055-201ENST00000610739 97 ntBASIC1.86□□□□□ -2.11
TRIM55Q9BYV6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
TRIM55Q9BYV6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
TRIM55Q9BYV6 MIR1302-7-201ENST00000408841 72 ntBASIC1.85□□□□□ -2.11
TRIM55Q9BYV6 IGKV1-22-201ENST00000524313 326 ntBASIC1.85□□□□□ -2.11
TRIM55Q9BYV6 AP003716.2-201ENST00000528260 108 ntBASIC1.85□□□□□ -2.11
TRIM55Q9BYV6 MTND5P34-201ENST00000568888 325 ntBASIC1.85□□□□□ -2.11
TRIM55Q9BYV6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms