Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 HMGN1P33-201ENST00000432945 451 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 FGF7P7-201ENST00000514120 227 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 RNU7-79P-201ENST00000516082 62 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 Y_RNA.681-201ENST00000516445 113 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 MIR4796-201ENST00000580742 81 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 AC243994.1-201ENST00000618627 109 ntBASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.96□□□□□ -1.94
COL25A1Q9BXS0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 RNU6-471P-201ENST00000383944 106 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 RNU6-540P-201ENST00000384622 101 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 RNU6-602P-201ENST00000411155 105 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 RNU7-85P-201ENST00000458851 63 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 AC018868.1-201ENST00000491307 315 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 RNU6-1108P-201ENST00000516308 104 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 MIR4484-201ENST00000582855 83 ntBASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL25A1Q9BXS0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 RNU6-160P-201ENST00000384591 107 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 MIR516B2-201ENST00000385190 85 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 U8.16-201ENST00000391279 133 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AC006539.3-201ENST00000454258 129 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AC006483.1-201ENST00000487308 313 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 SNORA31.10-201ENST00000516482 106 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 RNU6-807P-201ENST00000516805 107 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 MIR8055-201ENST00000610739 97 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 MIR8065-201ENST00000620577 100 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AC022149.2-201ENST00000621061 203 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AP001362.1-201ENST00000625165 124 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AC110079.1-202ENST00000635213 138 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 U6.111-201ENST00000636093 83 ntBASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
COL25A1Q9BXS0 AC245060.5-201ENST00000610778 3293 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 HSBP1P2-201ENST00000299671 229 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 RNU5F-1-201ENST00000362507 117 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 SNORD30.1-201ENST00000391309 70 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 RPL23AP42-201ENST00000471152 471 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 MIR548AR-201ENST00000582191 57 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 AL512598.1-201ENST00000610158 273 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 MIR1297-201ENST00000637311 77 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 MIR7515-201ENST00000637837 67 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 WWP1P1-201ENST00000466609 2769 ntBASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL25A1Q9BXS0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 Y_RNA.374-201ENST00000365606 101 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 RNU6-296P-201ENST00000384608 107 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 RNU6-443P-201ENST00000384780 107 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 MIR635-201ENST00000384830 98 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 MIR520H-201ENST00000385126 88 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 MIR561-201ENST00000385216 97 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 SNORD28B-201ENST00000390993 75 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 RNU6-587P-201ENST00000391282 106 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 SNORD59.2-201ENST00000516873 68 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 MIR8066-201ENST00000617280 78 ntBASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL25A1Q9BXS0 AC073325.2-201ENST00000339545 159 ntBASIC2.91□□□□□ -1.94
COL25A1Q9BXS0 AL356320.1-201ENST00000429616 163 ntBASIC2.91□□□□□ -1.94
COL25A1Q9BXS0 MIR664A-201ENST00000626086 82 ntBASIC2.91□□□□□ -1.94
COL25A1Q9BXS0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.91□□□□□ -1.94
COL25A1Q9BXS0 MIR452-201ENST00000385020 85 ntBASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 MIR136-201ENST00000385207 82 ntBASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 RNA5SP168-201ENST00000516642 112 ntBASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
COL25A1Q9BXS0 RNA5SP493-201ENST00000364115 91 ntBASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 SNORA64-201ENST00000384674 134 ntBASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 RNU6-321P-201ENST00000410912 106 ntBASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 RNA5SP21-201ENST00000410917 96 ntBASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 snoU13.31-201ENST00000607291 104 ntBASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL25A1Q9BXS0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 MIR1262-201ENST00000408276 93 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms