Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DNAJC19P2-201ENST00000593340 302 ntBASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 AL049861.1-201ENST00000603130 150 ntBASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 AC097639.2-201ENST00000603159 172 ntBASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 uc_338.4-201ENST00000616635 176 ntBASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CHRDL1Q9BU40 MIR367-201ENST00000362299 68 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 SNORA25.3-201ENST00000363205 127 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.218-201ENST00000364218 104 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.634-201ENST00000364811 113 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 RNU6-1138P-201ENST00000365359 106 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.363-201ENST00000365529 113 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.497-201ENST00000384447 98 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.542-201ENST00000384641 111 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 RNU6-959P-201ENST00000384671 107 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 MIR548A2-201ENST00000384956 97 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 RNU6-588P-201ENST00000410281 105 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 TMSB4XP3-201ENST00000445144 114 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 SNORD123-201ENST00000459473 70 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 RNU7-41P-201ENST00000515917 61 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 SNORA74.3-201ENST00000517108 154 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 AC007751.1-201ENST00000529260 376 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 MIR2681-201ENST00000581814 105 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 AC008507.4-201ENST00000585464 127 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 MIR376A2-201ENST00000636782 80 ntBASIC0.8□□□□□ -2.28
CHRDL1Q9BU40 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.224-201ENST00000364308 111 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.280-201ENST00000364765 112 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU6-728P-201ENST00000365375 104 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.357-201ENST00000365487 109 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU6-597P-201ENST00000365620 102 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU6-442P-201ENST00000383968 104 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.488-201ENST00000384403 102 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MIR520C-201ENST00000385005 87 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU6-460P-201ENST00000391158 108 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MIR1276-201ENST00000408707 83 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU2-55P-201ENST00000411146 174 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 AC107027.2-201ENST00000512197 115 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 SNORA25.12-201ENST00000516202 82 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 RNU7-149P-201ENST00000516739 59 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MIR548X2-201ENST00000579776 100 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MIR378D2-201ENST00000580636 98 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 AL365222.1-201ENST00000614661 98 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 AC015726.2-201ENST00000620112 122 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MTND1P7-201ENST00000632801 297 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 AC010332.2-201ENST00000613083 1904 ntBASIC0.79□□□□□ -2.28
CHRDL1Q9BU40 MTND5P32-201ENST00000560711 1802 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.294-201ENST00000364916 102 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.337-201ENST00000365312 102 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.393-201ENST00000383936 102 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.420-201ENST00000384043 110 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 SNORD61-201ENST00000384252 73 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 SNORD38C-201ENST00000384381 69 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.525-201ENST00000384570 113 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 SNORD28B-201ENST00000390993 75 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 RNA5SP153-201ENST00000516498 76 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.686-201ENST00000516548 134 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 RNU6-1234P-201ENST00000516877 103 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 RNU6-971P-201ENST00000516920 106 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 AC112693.2-201ENST00000556538 232 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 MIR3646-201ENST00000578301 84 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
CHRDL1Q9BU40 Y_RNA.71-201ENST00000362892 104 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.191-201ENST00000363972 113 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU6-268P-201ENST00000364174 107 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU4-38P-201ENST00000364472 129 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.261-201ENST00000364631 102 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.291-201ENST00000364886 113 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.432-201ENST00000384087 111 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU6-22P-201ENST00000384355 107 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 SNORA75.2-201ENST00000391138 150 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 SNORA75.3-201ENST00000391231 150 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU6-938P-201ENST00000411285 103 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.666-201ENST00000516187 112 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU6-1299P-201ENST00000516316 100 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 RNU7-181P-201ENST00000517234 74 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 MIR4764-201ENST00000580680 88 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 Pinc.1-201ENST00000616452 154 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 AP001340.1-201ENST00000624405 217 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 MIR6844-201ENST00000637122 62 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
CHRDL1Q9BU40 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
CHRDL1Q9BU40 RNU6-888P-201ENST00000363010 101 ntBASIC0.76□□□□□ -2.29
CHRDL1Q9BU40 SNORA25.7-201ENST00000364375 127 ntBASIC0.76□□□□□ -2.29
CHRDL1Q9BU40 Y_RNA.330-201ENST00000365230 109 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms