Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.78-201ENST00000362970 110 ntBASIC2.58□□□□□ -2
SYNGAP1Q96PV0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.58□□□□□ -2
SYNGAP1Q96PV0 MIR136-201ENST00000385207 82 ntBASIC2.58□□□□□ -2
SYNGAP1Q96PV0 RNVU1-2-201ENST00000516326 135 ntBASIC2.58□□□□□ -2
SYNGAP1Q96PV0 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.58□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.57□□□□□ -2
SYNGAP1Q96PV0 MIR452-201ENST00000385020 85 ntBASIC2.57□□□□□ -2
SYNGAP1Q96PV0 MIR3152-201ENST00000579801 74 ntBASIC2.57□□□□□ -2
SYNGAP1Q96PV0 AC087741.2-201ENST00000619415 172 ntBASIC2.57□□□□□ -2
SYNGAP1Q96PV0 MIR1255B1-201ENST00000636325 63 ntBASIC2.57□□□□□ -2
SYNGAP1Q96PV0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.388-201ENST00000383919 113 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 RNU6-42P-201ENST00000384165 107 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 MIR520A-201ENST00000384862 85 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 SNORA7.5-201ENST00000410672 110 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 RPS23P4-201ENST00000487908 423 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 RPL23AP63-201ENST00000498752 471 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.56□□□□□ -2
SYNGAP1Q96PV0 SCARNA23-201ENST00000516060 130 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 AL442128.1-201ENST00000615151 90 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 MALAT1.1-201ENST00000618249 95 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 AC095038.3-201ENST00000634439 195 ntBASIC2.56□□□□□ -2
SYNGAP1Q96PV0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SYNGAP1Q96PV0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SYNGAP1Q96PV0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SYNGAP1Q96PV0 RNU6-1134P-201ENST00000365156 101 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 RNU6-409P-201ENST00000384114 104 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 SNORA70.7-201ENST00000384159 133 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 PGBD4P5-201ENST00000445958 426 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 SNORA31.4-201ENST00000516049 129 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 RNA5SP33-201ENST00000516687 98 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
SYNGAP1Q96PV0 MIR4709-201ENST00000577272 72 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 MIR4791-201ENST00000607666 84 ntBASIC2.55□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 SNORD77B-201ENST00000391112 67 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 RNU6-733P-201ENST00000410759 104 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 RNU7-53P-201ENST00000516705 60 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 RNU6-844P-201ENST00000517175 102 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 MIR3618-201ENST00000580330 88 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
SYNGAP1Q96PV0 RNU4-67P-201ENST00000364569 141 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 Y_RNA.299-201ENST00000364973 94 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 SNORA17.3-201ENST00000391159 129 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 MIR1276-201ENST00000408707 83 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNU6-893P-201ENST00000458841 100 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 MIR6504-201ENST00000613520 61 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 SNORD3E-202ENST00000627253 216 ntBASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SYNGAP1Q96PV0 RNU6-661P-201ENST00000362409 107 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 SNORA22.1-201ENST00000362701 134 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 MIR605-201ENST00000385078 83 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 RNU4-69P-201ENST00000410677 143 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP437-201ENST00000517249 129 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 RMST_2.1-201ENST00000617263 136 ntBASIC2.52□□□□□ -2.01
SYNGAP1Q96PV0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 SNORA32-201ENST00000384072 121 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-747P-201ENST00000390928 104 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-241P-201ENST00000391148 104 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP465-201ENST00000391195 109 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 MIR1283-2-201ENST00000408621 87 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-177P-201ENST00000411257 104 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 BTF3P4-201ENST00000418852 495 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RPS29P29-201ENST00000456396 171 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-795P-201ENST00000516323 103 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-363P-201ENST00000362895 105 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP261-201ENST00000410536 106 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP501-201ENST00000410990 112 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 SNORD123-201ENST00000459473 70 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-162P-201ENST00000516228 103 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 MIR548AR-201ENST00000582191 57 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 AC062037.1-201ENST00000605302 128 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms