Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AP002004.2-201ENST00000531656 154 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 AC004812.1-201ENST00000540773 146 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 SNORD115-13-201ENST00000363358 82 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 Y_RNA.155-201ENST00000363632 101 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 SNORD115-16-201ENST00000363887 82 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 RNU4-67P-201ENST00000364569 141 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 SNORD115-1-201ENST00000364961 82 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 Y_RNA.454-201ENST00000384224 113 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CHFRQ96EP1 RNU7-80P-201ENST00000459562 61 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 SNORD45.4-201ENST00000516629 73 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
CHFRQ96EP1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHFRQ96EP1 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHFRQ96EP1 MIR342-201ENST00000362212 99 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 Y_RNA.437-201ENST00000384113 113 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 RNU6-409P-201ENST00000384114 104 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 AC087499.4-201ENST00000448505 178 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 RNU1-142P-201ENST00000516682 145 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 AL353149.1-201ENST00000610667 244 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHFRQ96EP1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
CHFRQ96EP1 ICE2P2-201ENST00000483823 2787 ntBASIC2.13□□□□□ -2.07
CHFRQ96EP1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CHFRQ96EP1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 SNORD114-6-201ENST00000364393 72 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 Y_RNA.467-201ENST00000384297 102 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 SNORD116-22-201ENST00000384430 92 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 RNU11-5P-201ENST00000391216 129 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 POLR2J4-204ENST00000418424 324 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 MRPL35P3-201ENST00000421557 364 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 SNX2P2-201ENST00000424553 323 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 RNU2-11P-201ENST00000459191 187 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 MIR1270-201ENST00000459320 83 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 AL163195.1-201ENST00000496941 348 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.12□□□□□ -2.07
CHFRQ96EP1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHFRQ96EP1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHFRQ96EP1 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 SNORA8-201ENST00000384574 139 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 Y_RNA.620-201ENST00000411009 88 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 MIR4778-201ENST00000577635 80 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
CHFRQ96EP1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CHFRQ96EP1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHFRQ96EP1 Y_RNA.95-201ENST00000363079 95 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 SNORA7.5-201ENST00000410672 110 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 AC139453.2-201ENST00000487255 133 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 AC018868.1-201ENST00000491307 315 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.1□□□□□ -2.07
CHFRQ96EP1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 AC021613.1-201ENST00000623880 111 ntBASIC2.1□□□□□ -2.07
CHFRQ96EP1 Y_RNA.171-201ENST00000363760 102 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 Y_RNA.377-201ENST00000365644 108 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 SNORA18-201ENST00000384416 132 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 RNU6-24P-201ENST00000384440 107 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 RNA5SP489-201ENST00000410986 109 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 RNU7-45P-201ENST00000459460 63 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 RNU6-998P-201ENST00000515894 101 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 MIR4668-201ENST00000582284 70 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.09□□□□□ -2.07
CHFRQ96EP1 AC006160.2-201ENST00000637708 154 ntBASIC2.09□□□□□ -2.07
CHFRQ96EP1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHFRQ96EP1 AL442644.1-201ENST00000454390 3105 ntBASIC2.09□□□□□ -2.08
CHFRQ96EP1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHFRQ96EP1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNU1-17P-201ENST00000363022 152 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 SNORD45B-201ENST00000364617 72 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 SNORA27-201ENST00000384323 126 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNU6-616P-201ENST00000384353 107 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNA5SP323-201ENST00000391094 133 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNU6-887P-201ENST00000410660 100 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNU4-69P-201ENST00000410677 143 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 AL022718.1-201ENST00000412004 84 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 AC069257.2-201ENST00000441819 155 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNA5SP458-201ENST00000516188 119 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
CHFRQ96EP1 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
CHFRQ96EP1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms