Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORD116-15-201ENST00000384445 92 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 SNORD116-19-201ENST00000384729 92 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 AC008267.6-201ENST00000441664 139 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU7-73P-201ENST00000458743 63 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU6-62P-201ENST00000516526 102 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU6-1234P-201ENST00000516877 103 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU6-958P-201ENST00000516995 106 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 RNU6-235P-201ENST00000362644 107 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 RNA5SP458-201ENST00000516188 119 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 MIR3937-201ENST00000580135 106 ntBASIC1.57□□□□□ -2.16
ATG4AQ8WYN0 Y_RNA.127-201ENST00000363386 109 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 RNU6-690P-201ENST00000365242 106 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 RNU7-41P-201ENST00000515917 61 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 SNORA31.4-201ENST00000516049 129 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 RNU6-240P-201ENST00000516098 97 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 RNU6-479P-201ENST00000516348 105 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 AC108081.1-201ENST00000604358 221 ntBASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ATG4AQ8WYN0 RNA5SP48-201ENST00000363969 126 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 snoU13.16-201ENST00000459350 104 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 RN7SKP179-201ENST00000516126 217 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 RNU6-1333P-201ENST00000516162 93 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 AL365222.1-201ENST00000614661 98 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 MIR4251-201ENST00000635819 61 ntBASIC1.55□□□□□ -2.16
ATG4AQ8WYN0 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU6-1168P-201ENST00000390831 104 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU6-913P-201ENST00000390913 95 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 MIR548I2-201ENST00000408348 149 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU2-51P-201ENST00000410708 197 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 RNU6-659P-201ENST00000516454 104 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 AC133485.4-201ENST00000561835 220 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 AC138907.4-201ENST00000570107 226 ntBASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
ATG4AQ8WYN0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RNU4-16P-201ENST00000364737 141 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RPL39P39-201ENST00000455840 151 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RNU7-107P-201ENST00000459121 61 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RN7SKP19-201ENST00000516016 252 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RNU6-772P-201ENST00000516042 105 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 RNU6-313P-201ENST00000516317 112 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 AL137067.1-201ENST00000615933 120 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 AC021613.1-201ENST00000623880 111 ntBASIC1.53□□□□□ -2.16
ATG4AQ8WYN0 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 RNU6-1081P-201ENST00000384537 107 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 RNA5SP261-201ENST00000410536 106 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.712-201ENST00000517011 92 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 IGKV1-22-201ENST00000524313 326 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 HSPE1P19-201ENST00000603327 295 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 AL020996.3-201ENST00000606617 222 ntBASIC1.52□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 SNORD58C-201ENST00000365223 64 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-747P-201ENST00000390928 104 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-241P-201ENST00000391148 104 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 SNORA26.6-201ENST00000391256 115 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-177P-201ENST00000411257 104 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU7-45P-201ENST00000459460 63 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-947P-201ENST00000516264 106 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 RNU6-1061P-201ENST00000516530 99 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 AC021443.1-201ENST00000604478 211 ntBASIC1.51□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 SNORA22C-201ENST00000384614 134 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms