| XAGE3 | Q8WTP9 | RNU6-904P-201 | ENST00000516206 | 101 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | HMSD-204 | ENST00000526932 | 162 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | C16orf97-206 | ENST00000622950 | 415 nt | TSL 2 BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | COMMD6-213 | ENST00000626103 | 120 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| XAGE3 | Q8WTP9 | MIR590-201 | ENST00000385008 | 97 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR9-3-201 | ENST00000385084 | 90 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA26.6-201 | ENST00000391256 | 115 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR1912-201 | ENST00000410389 | 80 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC093850.1-201 | ENST00000454121 | 251 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA40.13-201 | ENST00000516379 | 120 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC095038.3-201 | ENST00000634439 | 195 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNA5SP450-201 | ENST00000411206 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-893P-201 | ENST00000458841 | 100 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RPS29P11-201 | ENST00000496507 | 171 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | Y_RNA.430-201 | ENST00000384081 | 110 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNY4P30-201 | ENST00000410216 | 95 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AL603825.1-201 | ENST00000438481 | 80 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-1258P-201 | ENST00000516911 | 111 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC007370.2-201 | ENST00000506899 | 2694 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU1-52P-201 | ENST00000384190 | 164 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA19.1-201 | ENST00000410656 | 129 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-717P-201 | ENST00000459076 | 104 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | CAPS2-203 | ENST00000393284 | 3430 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SCN7A-201 | ENST00000409855 | 7183 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-816P-201 | ENST00000390914 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-1268P-201 | ENST00000391214 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-1239P-201 | ENST00000391310 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU7-45P-201 | ENST00000459460 | 63 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU1-40P-201 | ENST00000516816 | 164 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU1-97P-201 | ENST00000516872 | 164 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR3152-201 | ENST00000579801 | 74 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORD3E-202 | ENST00000627253 | 216 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR1302-4-201 | ENST00000408701 | 150 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RPL39P25-201 | ENST00000449384 | 154 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | hsa-mir-3158-1.1-201 | ENST00000637571 | 81 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-363P-201 | ENST00000362895 | 105 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | Y_RNA.466-201 | ENST00000384294 | 113 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU4-69P-201 | ENST00000410677 | 143 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC113410.1-201 | ENST00000505029 | 247 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-109P-201 | ENST00000516364 | 107 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-184P-201 | ENST00000516514 | 107 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6ATAC12P-201 | ENST00000516542 | 115 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | Y_RNA.773-201 | ENST00000607168 | 90 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| XAGE3 | Q8WTP9 | TBL1XR1-208 | ENST00000430069 | 7948 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | MTATP8P2-201 | ENST00000435212 | 202 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | RNU7-67P-201 | ENST00000459003 | 62 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | RNU7-113P-201 | ENST00000459273 | 62 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | SNORA74.3-201 | ENST00000517108 | 154 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | TP73-AS1.1-201 | ENST00000611447 | 161 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | SLC8A1-AS1-230 | ENST00000627538 | 212 nt | TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| XAGE3 | Q8WTP9 | RNU6-1123P-201 | ENST00000362347 | 106 nt | BASIC | 2.32 | □□□□□ -2.04 | | |