Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL670379.3-201ENST00000605040 251 ntBASIC1.48□□□□□ -2.17
SNED1Q8TER0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
SNED1Q8TER0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SNED1Q8TER0 SNORD14E-201ENST00000364009 85 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 RNU6-442P-201ENST00000383968 104 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 MIR1263-201ENST00000408324 86 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
SNED1Q8TER0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.47□□□□□ -2.17
SNED1Q8TER0 AC090821.2-201ENST00000523552 176 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 AC025166.1-201ENST00000612411 163 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 AC134878.1-201ENST00000619901 243 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
SNED1Q8TER0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 MIR548A2-201ENST00000384956 97 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 MIR548A1-201ENST00000385041 97 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 RNA5SP482-201ENST00000391269 118 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 Y_RNA.651-201ENST00000459380 103 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 RNA5SP436-201ENST00000516020 115 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 SNORD33.1-201ENST00000516213 88 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 SNORD45.4-201ENST00000516629 73 ntBASIC1.46□□□□□ -2.18
SNED1Q8TER0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.46□□□□□ -2.18
SNED1Q8TER0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
SNED1Q8TER0 SNORD116-21-201ENST00000384507 92 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNU6-440P-201ENST00000390882 105 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNA5SP109-201ENST00000391010 116 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 MIR548O-201ENST00000408583 114 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNA5SP100-201ENST00000410903 110 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNA5SP59-201ENST00000410922 110 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 HMGN1P33-201ENST00000432945 451 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 AL606517.2-201ENST00000442855 241 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNU6-589P-201ENST00000516485 107 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNU7-28P-201ENST00000516759 62 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 RNU6-1149P-201ENST00000516810 97 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.45□□□□□ -2.18
SNED1Q8TER0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 AC006441.5-201ENST00000612680 209 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 MIR8074-201ENST00000615081 81 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.45□□□□□ -2.18
SNED1Q8TER0 MTND5P18-201ENST00000445624 1801 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SNED1Q8TER0 RNU6-268P-201ENST00000364174 107 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 SNORA2.2-201ENST00000365473 135 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 MIR518F-201ENST00000384973 87 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SNED1Q8TER0 RNA5SP236-201ENST00000516169 116 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 IGKV1-22-201ENST00000524313 326 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 MIR4762-201ENST00000585261 75 ntBASIC1.44□□□□□ -2.18
SNED1Q8TER0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SNED1Q8TER0 Y_RNA.35-201ENST00000362601 101 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 SNORD115-28-201ENST00000363931 81 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 RNU6-1189P-201ENST00000383958 107 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 Y_RNA.528-201ENST00000384575 108 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.43□□□□□ -2.18
SNED1Q8TER0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.43□□□□□ -2.18
SNED1Q8TER0 CYCTP-201ENST00000504253 315 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 RNU7-25P-201ENST00000516544 62 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 RNU6-113P-201ENST00000516653 101 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 SCARNA15-202ENST00000516881 127 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 AL137067.1-201ENST00000615933 120 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 MIR8054-201ENST00000620877 86 ntBASIC1.43□□□□□ -2.18
SNED1Q8TER0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
SNED1Q8TER0 Y_RNA.37-201ENST00000362606 108 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 U8.5-201ENST00000364528 136 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 AC063976.4-201ENST00000421971 163 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 RNVU1-2-201ENST00000516326 135 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 RNU7-70P-201ENST00000516941 66 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 MIR5094-201ENST00000578766 85 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 AC022513.1-201ENST00000624512 117 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
SNED1Q8TER0 RNU6-755P-201ENST00000364400 103 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SNED1Q8TER0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.41□□□□□ -2.18
SNED1Q8TER0 SNRPGP14-201ENST00000435400 219 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 STAG3L5P-204ENST00000443759 179 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 AC114811.1-201ENST00000507207 168 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 SUB1P4-201ENST00000566062 339 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 MIR4422-201ENST00000581938 83 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 RN7SL793P-201ENST00000583259 296 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 MIR5197-201ENST00000583721 112 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 SNORA28-201ENST00000606769 126 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
SNED1Q8TER0 MIR376A2-201ENST00000636782 80 ntBASIC1.41□□□□□ -2.18
SNED1Q8TER0 MIR424-201ENST00000362227 98 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 RN7SKP200-201ENST00000410564 320 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms