Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU7-43P-201ENST00000516554 64 ntBASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 AC243994.1-201ENST00000618627 109 ntBASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.127-201ENST00000363386 109 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNU6-647P-201ENST00000364243 107 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNU2-11P-201ENST00000459191 187 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNU6-1333P-201ENST00000516162 93 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 AC108081.1-201ENST00000604358 221 ntBASIC1.36□□□□□ -2.19
CLIP4Q8N3C7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU6-349P-201ENST00000362402 107 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.261-201ENST00000364631 102 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 SNORD116-14-201ENST00000383894 92 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 SNORD116-17-201ENST00000383929 92 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 SNORD116-15-201ENST00000384445 92 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 SNORD116-19-201ENST00000384729 92 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 SNORD41-201ENST00000386967 70 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU6-1168P-201ENST00000390831 104 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU6-1154P-201ENST00000391001 104 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 AC008267.6-201ENST00000441664 139 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU7-107P-201ENST00000459121 61 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RN7SKP19-201ENST00000516016 252 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU6-240P-201ENST00000516098 97 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 HSPE1P19-201ENST00000603327 295 ntBASIC1.35□□□□□ -2.19
CLIP4Q8N3C7 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNU6-690P-201ENST00000365242 106 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNY1P6-201ENST00000384193 109 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 SNORA51.10-201ENST00000384418 136 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.525-201ENST00000384570 113 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNA5SP445-201ENST00000515889 115 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 SNORA31.4-201ENST00000516049 129 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNU6-479P-201ENST00000516348 105 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 RNU6-1061P-201ENST00000516530 99 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 AC133485.4-201ENST00000561835 220 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 AC138907.4-201ENST00000570107 226 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU6-1081P-201ENST00000384537 107 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 SNORA22C-201ENST00000384614 134 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU2-51P-201ENST00000410708 197 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU6-313P-201ENST00000516317 112 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU6-659P-201ENST00000516454 104 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 MIR548AI-201ENST00000579940 88 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 AL137067.1-201ENST00000615933 120 ntBASIC1.33□□□□□ -2.2
CLIP4Q8N3C7 SNORD33-201ENST00000362761 85 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 Y_RNA.291-201ENST00000364886 113 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 RNU6-913P-201ENST00000390913 95 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 Y_RNA.617-201ENST00000410920 90 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 RNU7-45P-201ENST00000459460 63 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 IGKV1-22-201ENST00000524313 326 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CLIP4Q8N3C7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU4-16P-201ENST00000364737 141 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU7-73P-201ENST00000458743 63 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU6-772P-201ENST00000516042 105 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU6-781P-201ENST00000516377 101 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 MIR3192-201ENST00000584920 77 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 MIR4251-201ENST00000635819 61 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.31□□□□□ -2.2
CLIP4Q8N3C7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms