Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 AL773524.1-201ENST00000614065 229 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.61□□□□□ -1.99
DEPDC4Q8N2C3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 MIR548AO-201ENST00000579992 96 ntBASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 MIR4439-201ENST00000583746 80 ntBASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DEPDC4Q8N2C3 RNA5SP259-201ENST00000365541 109 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 AC244636.1-201ENST00000421152 228 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 RNU7-2P-201ENST00000516096 62 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 AL357312.1-201ENST00000603879 298 ntBASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.59□□□□□ -1.99
DEPDC4Q8N2C3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
DEPDC4Q8N2C3 RNA5SP276-201ENST00000362580 94 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 RNU6-342P-201ENST00000384521 104 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 SNORD38B-201ENST00000384690 67 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 RNY1P7-201ENST00000384743 110 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 AC108729.3-201ENST00000513484 108 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 SNORD38B-202ENST00000625943 69 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 AL512310.12-203ENST00000640543 90 ntBASIC2.58□□□□□ -2
DEPDC4Q8N2C3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DEPDC4Q8N2C3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DEPDC4Q8N2C3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DEPDC4Q8N2C3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
DEPDC4Q8N2C3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
DEPDC4Q8N2C3 RNU7-41P-201ENST00000515917 61 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 SNORD111.1-201ENST00000516421 86 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 AC015688.6-201ENST00000577737 104 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 AC012531.4-201ENST00000616509 177 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 AP000648.3-201ENST00000623539 4507 ntBASIC2.57□□□□□ -2
DEPDC4Q8N2C3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
DEPDC4Q8N2C3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-60P-201ENST00000364792 103 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 SNORD41-201ENST00000386967 70 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 SNORA26.2-201ENST00000390922 122 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-447P-201ENST00000410293 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-1118P-201ENST00000410382 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-1076P-201ENST00000410397 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-355P-201ENST00000410427 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-791P-201ENST00000410467 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-705P-201ENST00000410601 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-1100P-201ENST00000410691 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-860P-201ENST00000410860 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-1217P-201ENST00000411276 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-785P-201ENST00000411324 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 MRPL35P3-201ENST00000421557 364 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 RNU6-250P-201ENST00000516958 103 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.56□□□□□ -2
DEPDC4Q8N2C3 MIR4713-201ENST00000582691 75 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 U6.90-201ENST00000614007 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 U6.70-201ENST00000620287 104 ntBASIC2.56□□□□□ -2
DEPDC4Q8N2C3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DEPDC4Q8N2C3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DEPDC4Q8N2C3 SNORA54-201ENST00000384281 123 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 MIR206-201ENST00000384872 86 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 RNY4P29-201ENST00000410801 97 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 RNU7-79P-201ENST00000516082 62 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 RNU6-795P-201ENST00000516323 103 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 SNORA77B-201ENST00000578179 125 ntBASIC2.55□□□□□ -2
DEPDC4Q8N2C3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
DEPDC4Q8N2C3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
DEPDC4Q8N2C3 SNORD114-10-201ENST00000363409 72 ntBASIC2.54□□□□□ -2
DEPDC4Q8N2C3 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
DEPDC4Q8N2C3 RNU7-61P-201ENST00000515897 61 ntBASIC2.54□□□□□ -2
DEPDC4Q8N2C3 AC024614.2-201ENST00000577584 372 ntBASIC2.54□□□□□ -2
DEPDC4Q8N2C3 MIR4777-201ENST00000583710 86 ntBASIC2.54□□□□□ -2
DEPDC4Q8N2C3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.53□□□□□ -2
DEPDC4Q8N2C3 SNORA16B-201ENST00000364674 135 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 Y_RNA.290-201ENST00000364879 114 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 RNU6-439P-201ENST00000384188 106 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 RNU6-644P-201ENST00000391155 98 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 AC009474.2-201ENST00000451383 136 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 Y_RNA.705-201ENST00000516862 110 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 RNU6-762P-201ENST00000517107 102 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 AC026421.1-201ENST00000519101 163 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.53□□□□□ -2
DEPDC4Q8N2C3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
DEPDC4Q8N2C3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
DEPDC4Q8N2C3 AC090844.1-201ENST00000422019 156 ntBASIC2.52□□□□□ -2.01
DEPDC4Q8N2C3 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
DEPDC4Q8N2C3 MIR8074-201ENST00000615081 81 ntBASIC2.52□□□□□ -2.01
DEPDC4Q8N2C3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.52□□□□□ -2.01
DEPDC4Q8N2C3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms