Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTND4LP9-201ENST00000427694 174 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 MIR378D2-201ENST00000580636 98 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 AC087685.1-201ENST00000587507 141 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Pinc.1-201ENST00000616452 154 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.294-201ENST00000364916 102 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-597P-201ENST00000365620 102 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.420-201ENST00000384043 110 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 MIR518F-201ENST00000384973 87 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 SNORD45.4-201ENST00000516629 73 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 AC112693.2-201ENST00000556538 232 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 MIR548X2-201ENST00000579776 100 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 MIR2681-201ENST00000581814 105 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 JPX_2.1-201ENST00000614161 69 ntBASIC1.02□□□□□ -2.25
NHLRC1Q6VVB1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 RNU2-55P-201ENST00000411146 174 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-938P-201ENST00000411285 103 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 RNA5SP153-201ENST00000516498 76 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 RNU7-25P-201ENST00000516544 62 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 MTND1P7-201ENST00000632801 297 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 AC132825.6-201ENST00000638861 357 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 AC010332.2-201ENST00000613083 1904 ntBASIC1.01□□□□□ -2.25
NHLRC1Q6VVB1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
NHLRC1Q6VVB1 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NHLRC1Q6VVB1 SNORD14E-201ENST00000364009 85 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-268P-201ENST00000364174 107 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.280-201ENST00000364765 112 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 SNORD77.3-201ENST00000391113 65 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 AL606753.1-201ENST00000427435 87 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1□□□□□ -2.25
NHLRC1Q6VVB1 TMSB4XP3-201ENST00000445144 114 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 RNU7-90P-201ENST00000459216 62 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-1234P-201ENST00000516877 103 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-971P-201ENST00000516920 106 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 MIR3129-201ENST00000581095 76 ntBASIC1□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-888P-201ENST00000363010 101 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 SNORD114-22-201ENST00000365423 72 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-959P-201ENST00000384671 107 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 MIR526A1-201ENST00000384897 85 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 SNORA75.5-201ENST00000391291 81 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU2-70P-201ENST00000410718 179 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 AF228730.3-201ENST00000436691 102 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNA5SP236-201ENST00000516169 116 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 RNU7-43P-201ENST00000516554 64 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 SCARNA15-202ENST00000516881 127 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 AL365205.2-201ENST00000594586 68 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 AC006441.5-201ENST00000612680 209 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 AL365222.1-201ENST00000614661 98 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 MIR6844-201ENST00000637122 62 ntBASIC0.99□□□□□ -2.25
NHLRC1Q6VVB1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 RNA5SP48-201ENST00000363969 126 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.261-201ENST00000364631 102 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 SNORD38C-201ENST00000384381 69 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 MIR520C-201ENST00000385005 87 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 MIR548O-201ENST00000408583 114 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 Y_RNA.651-201ENST00000459380 103 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 RNU4-57P-201ENST00000515980 135 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 SNORD36C-201ENST00000516733 66 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-789P-201ENST00000517105 102 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 SNORA74.3-201ENST00000517108 154 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 IGKV1-22-201ENST00000524313 326 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 MIR3646-201ENST00000578301 84 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 RMST_2.1-201ENST00000617263 136 ntBASIC0.98□□□□□ -2.25
NHLRC1Q6VVB1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-309P-201ENST00000364573 106 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 RNU6-915P-201ENST00000364943 103 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 SNORD24-201ENST00000383884 75 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 MIR7-2-201ENST00000384970 110 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 MIR548I2-201ENST00000408348 149 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
NHLRC1Q6VVB1 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms