Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 SNORD115-29-201ENST00000362834 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-9-201ENST00000362912 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNY3P2-201ENST00000362918 102 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-21-201ENST00000362963 81 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-14-201ENST00000363090 81 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-13-201ENST00000363358 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-41-201ENST00000363608 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-11-201ENST00000363616 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-5-201ENST00000363633 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-39-201ENST00000363694 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-4-201ENST00000363810 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-16-201ENST00000363887 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-6-201ENST00000363942 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-42-201ENST00000364273 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-15-201ENST00000364809 81 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-1-201ENST00000364961 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-26-201ENST00000365067 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-10-201ENST00000365073 81 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-43-201ENST00000365503 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SNORD115-36-201ENST00000365629 82 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU6-573P-201ENST00000383938 106 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU6-1275P-201ENST00000391087 107 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 U8.16-201ENST00000391279 133 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 BX510359.4-201ENST00000423750 193 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU7-96P-201ENST00000459535 64 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 SCARNA23-201ENST00000516060 130 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU6-1258P-201ENST00000516911 111 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU7-181P-201ENST00000517234 74 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 AC090821.2-201ENST00000523552 176 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 DEFB131E-201ENST00000532329 154 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.08□□□□□ -2.08
USP39Q53GS9 RNU6-661P-201ENST00000362409 107 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNU6-424P-201ENST00000384367 105 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNA5SP247-201ENST00000411181 105 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 AL035398.1-201ENST00000430869 322 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.07□□□□□ -2.08
USP39Q53GS9 AL353813.1-201ENST00000440700 253 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 RNU6-893P-201ENST00000458841 100 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 AC026421.1-201ENST00000519101 163 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.07□□□□□ -2.08
USP39Q53GS9 SNORA28-201ENST00000606769 126 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
USP39Q53GS9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USP39Q53GS9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
USP39Q53GS9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU6-363P-201ENST00000362895 105 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU6-833P-201ENST00000363486 107 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU6-1152P-201ENST00000384576 107 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 MIR450A2-201ENST00000385022 100 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 MIR577-201ENST00000385196 96 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 Y_RNA.601-201ENST00000410500 113 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU2-11P-201ENST00000459191 187 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 RNU7-45P-201ENST00000459460 63 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 AP003327.1-201ENST00000529684 127 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 AL513534.2-201ENST00000603836 250 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 AC069114.2-201ENST00000604699 304 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 MIR1245B-201ENST00000636115 69 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 AC245060.5-201ENST00000610778 3293 ntBASIC2.06□□□□□ -2.08
USP39Q53GS9 RNY1P10-201ENST00000363268 113 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 RNU4-36P-201ENST00000364294 144 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 Y_RNA.290-201ENST00000364879 114 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 SNORA4.2-201ENST00000365313 147 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 AL022718.1-201ENST00000412004 84 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 PGBD4P5-201ENST00000445958 426 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 MIR1270-201ENST00000459320 83 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 AC108729.3-201ENST00000513484 108 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 RNA5SP168-201ENST00000516642 112 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 MIR4694-201ENST00000578534 80 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
USP39Q53GS9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USP39Q53GS9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 Y_RNA.360-201ENST00000365512 102 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 RNU6-820P-201ENST00000384273 107 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 MIR605-201ENST00000385078 83 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 MIR29C-201ENST00000385231 88 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 MIR1267-201ENST00000408723 78 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 Y_RNA.593-201ENST00000410292 98 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.04□□□□□ -2.08
USP39Q53GS9 AC012531.4-201ENST00000616509 177 ntBASIC2.04□□□□□ -2.08
USP39Q53GS9 MIR494-201ENST00000349529 81 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 SNORD115-2-201ENST00000362842 82 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms