Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORA26.6-201ENST00000391256 115 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP4BP1P59074 JTBP1-201ENST00000441314 247 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 MIR4679-2-201ENST00000578358 77 ntBASIC2.33□□□□□ -2.04
CHMP4BP1P59074 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.171-201ENST00000363760 102 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.370-201ENST00000365589 108 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 SNORA24-201ENST00000384096 131 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CHMP4BP1P59074 AL445685.2-201ENST00000422551 342 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP4BP1P59074 MIR3683-201ENST00000580847 82 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 AL096840.1-201ENST00000603287 93 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 AC106754.2-201ENST00000623006 233 ntBASIC2.32□□□□□ -2.04
CHMP4BP1P59074 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CHMP4BP1P59074 SNORA19.1-201ENST00000410656 129 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 AL161935.2-201ENST00000414627 60 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 MIR1270-201ENST00000459320 83 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 RNU6-958P-201ENST00000516995 106 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 FAM106DP-201ENST00000586416 501 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 SNRPGP19-201ENST00000603826 189 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 MIR8074-201ENST00000615081 81 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHMP4BP1P59074 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.163-201ENST00000363702 113 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 RNU6-1014P-201ENST00000383940 103 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.495-201ENST00000384435 112 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 AC004965.1-201ENST00000413033 213 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 HMGN2P38-201ENST00000423806 265 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 AL035398.1-201ENST00000430869 322 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 RPL39P34-201ENST00000477141 156 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 RNA5SP458-201ENST00000516188 119 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 AC004812.1-201ENST00000540773 146 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 SNORA77B-201ENST00000578179 125 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 AL513534.2-201ENST00000603836 250 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 MIR6841-201ENST00000637129 72 ntBASIC2.3□□□□□ -2.04
CHMP4BP1P59074 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CHMP4BP1P59074 RNU6-1123P-201ENST00000362347 106 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 U8.6-201ENST00000364939 135 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.323-201ENST00000365157 109 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.328-201ENST00000365208 113 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 SNORA51.10-201ENST00000384418 136 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 MIR548D2-201ENST00000384955 97 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 HMGN1P33-201ENST00000432945 451 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 AL031737.1-201ENST00000450125 223 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 RNA5SP170-201ENST00000517150 101 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.773-201ENST00000607168 90 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 MIR4791-201ENST00000607666 84 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 RNU6-94P-201ENST00000607728 107 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 AC087741.2-201ENST00000619415 172 ntBASIC2.29□□□□□ -2.04
CHMP4BP1P59074 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.213-201ENST00000364178 111 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 Y_RNA.470-201ENST00000384307 117 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 RPS29P29-201ENST00000456396 171 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 RNA5SP364-201ENST00000516938 78 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
CHMP4BP1P59074 RNY4P6-201ENST00000363667 96 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CHMP4BP1P59074 U8.13-201ENST00000390842 128 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 SNORA48.3-201ENST00000391081 134 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 RNU6-412P-201ENST00000516434 106 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 SNORA74.3-201ENST00000517108 154 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 AC243994.1-201ENST00000618627 109 ntBASIC2.27□□□□□ -2.05
CHMP4BP1P59074 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHMP4BP1P59074 MIR302B-201ENST00000362188 73 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU1-17P-201ENST00000363022 152 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU6-905P-201ENST00000384434 107 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 Y_RNA.531-201ENST00000384589 121 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU6-1319P-201ENST00000390855 104 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU6-747P-201ENST00000390928 104 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU6-241P-201ENST00000391148 104 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU6-177P-201ENST00000411257 104 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU7-67P-201ENST00000459003 62 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RPS23P4-201ENST00000487908 423 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 RNU7-6P-201ENST00000516845 62 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 MIR3935-201ENST00000583472 104 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 AL020996.3-201ENST00000606617 222 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 MIR1255B1-201ENST00000636325 63 ntBASIC2.26□□□□□ -2.05
CHMP4BP1P59074 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.25□□□□□ -2.05
CHMP4BP1P59074 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-640P-201ENST00000363693 105 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-32P-201ENST00000383948 107 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-756P-201ENST00000383997 107 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-13P-201ENST00000384248 107 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-12P-201ENST00000384604 107 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 RNU6-41P-201ENST00000384741 107 ntBASIC2.25□□□□□ -2.05
CHMP4BP1P59074 AL603825.1-201ENST00000438481 80 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms