Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLRN1P58418 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLRN1P58418 MIR548A1-201ENST00000385041 97 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNU6-1319P-201ENST00000390855 104 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNU6-747P-201ENST00000390928 104 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNU6-241P-201ENST00000391148 104 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNA5SP144-201ENST00000410846 116 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNU6-177P-201ENST00000411257 104 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 HSPE1P24-201ENST00000450782 238 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 snoU13.26-201ENST00000459452 105 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 RNU7-41P-201ENST00000515917 61 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
CLRN1P58418 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 AL020996.3-201ENST00000606617 222 ntBASIC1.71□□□□□ -2.14
CLRN1P58418 SNORA26.6-201ENST00000391256 115 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 snoU13.16-201ENST00000459350 104 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 SNORD111.1-201ENST00000516421 86 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 RNU6-919P-201ENST00000516731 104 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 MIR3152-201ENST00000579801 74 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 MIR6717-201ENST00000622747 73 ntBASIC1.7□□□□□ -2.14
CLRN1P58418 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 Y_RNA.198-201ENST00000364013 98 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 SNORD116-21-201ENST00000384507 92 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 AL022718.1-201ENST00000412004 84 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 POLR2J4-204ENST00000418424 324 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 HMGN1P33-201ENST00000432945 451 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 AC022523.2-201ENST00000561045 150 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 GHRLOS.1-201ENST00000610995 70 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 MIR4251-201ENST00000635819 61 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 WWP1P1-201ENST00000466609 2769 ntBASIC1.69□□□□□ -2.14
CLRN1P58418 RNU6-1104P-201ENST00000384723 104 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 MIR504-201ENST00000385065 83 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 MT-TI-201ENST00000387365 69 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 AL035461.1-201ENST00000421490 332 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 AL512326.2-201ENST00000426359 151 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 RNU6-1258P-201ENST00000516911 111 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
CLRN1P58418 MIR548AO-201ENST00000579992 96 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 MIR8055-201ENST00000610739 97 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CLRN1P58418 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
CLRN1P58418 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
CLRN1P58418 Y_RNA.35-201ENST00000362601 101 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 Y_RNA.81-201ENST00000362997 102 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 Y_RNA.213-201ENST00000364178 111 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 RNA5SP261-201ENST00000410536 106 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 MIR3192-201ENST00000584920 77 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 AL357312.1-201ENST00000603879 298 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 AL096861.1-201ENST00000610899 123 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
CLRN1P58418 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.67□□□□□ -2.14
CLRN1P58418 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLRN1P58418 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.66□□□□□ -2.14
CLRN1P58418 SNORA22.1-201ENST00000362701 134 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 Y_RNA.171-201ENST00000363760 102 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 RNU6-44P-201ENST00000384045 107 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 RNU6-947P-201ENST00000516264 106 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 RNU6-589P-201ENST00000516485 107 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
CLRN1P58418 AC004812.1-201ENST00000540773 146 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 MIR3124-201ENST00000582636 67 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.66□□□□□ -2.14
CLRN1P58418 MIR6841-201ENST00000637129 72 ntBASIC1.66□□□□□ -2.14
CLRN1P58418 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.66□□□□□ -2.14
CLRN1P58418 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
CLRN1P58418 SNORA1.1-201ENST00000364671 133 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 Y_RNA.531-201ENST00000384589 121 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 MIR759-201ENST00000390224 91 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 SUMO2P12-201ENST00000405924 140 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 RPS3AP1-201ENST00000413190 320 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 RNU6-893P-201ENST00000458841 100 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 RN7SL274P-201ENST00000492268 272 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 RNU1-41P-201ENST00000516161 162 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 RNU1-48P-201ENST00000516400 162 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 Y_RNA.709-201ENST00000516952 92 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
CLRN1P58418 Y_RNA.430-201ENST00000384081 110 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 RNU6-880P-201ENST00000384526 107 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 RNY4P18-201ENST00000391107 89 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 RNA5SP489-201ENST00000410986 109 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.64□□□□□ -2.15
CLRN1P58418 AC009474.2-201ENST00000451383 136 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.64□□□□□ -2.15
CLRN1P58418 RNU7-113P-201ENST00000459273 62 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 snoU13.15-201ENST00000459407 104 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 AC007012.1-201ENST00000567192 175 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms