Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
GPC3P51654 RNU6-1160P-201ENST00000384546 104 ntBASIC0.54□□□□□ -2.32
GPC3P51654 Z97988.1-201ENST00000637697 135 ntBASIC0.54□□□□□ -2.32
GPC3P51654 Y_RNA.634-201ENST00000364811 113 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.304-201ENST00000365011 112 ntBASIC0.53□□□□□ -2.32
GPC3P51654 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
GPC3P51654 RNU6-1189P-201ENST00000383958 107 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.518-201ENST00000384552 113 ntBASIC0.53□□□□□ -2.32
GPC3P51654 MIR548A2-201ENST00000384956 97 ntBASIC0.53□□□□□ -2.32
GPC3P51654 SNORD77.3-201ENST00000391113 65 ntBASIC0.53□□□□□ -2.32
GPC3P51654 RNA5SP95-201ENST00000410319 137 ntBASIC0.53□□□□□ -2.32
GPC3P51654 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
GPC3P51654 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.53□□□□□ -2.32
GPC3P51654 MIR4282-201ENST00000583613 67 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.812-201ENST00000610788 101 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.784-201ENST00000613803 101 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.787-201ENST00000616522 101 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.780-201ENST00000617336 101 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.801-201ENST00000619005 101 ntBASIC0.53□□□□□ -2.32
GPC3P51654 AL589743.1-201ENST00000551932 2712 ntBASIC0.53□□□□□ -2.32
GPC3P51654 Y_RNA.66-201ENST00000362862 102 ntBASIC0.52□□□□□ -2.33
GPC3P51654 Y_RNA.117-201ENST00000363294 101 ntBASIC0.52□□□□□ -2.33
GPC3P51654 Y_RNA.145-201ENST00000363527 102 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-103P-201ENST00000363686 107 ntBASIC0.52□□□□□ -2.33
GPC3P51654 SNORA1.1-201ENST00000364671 133 ntBASIC0.52□□□□□ -2.33
GPC3P51654 Y_RNA.352-201ENST00000365439 102 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-484P-201ENST00000384016 107 ntBASIC0.52□□□□□ -2.33
GPC3P51654 Y_RNA.461-201ENST00000384263 103 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-125P-201ENST00000384505 107 ntBASIC0.52□□□□□ -2.33
GPC3P51654 Y_RNA.574-201ENST00000384766 95 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-938P-201ENST00000411285 103 ntBASIC0.52□□□□□ -2.33
GPC3P51654 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
GPC3P51654 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.52□□□□□ -2.33
GPC3P51654 RNU7-62P-201ENST00000458856 62 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-977P-201ENST00000516411 103 ntBASIC0.52□□□□□ -2.33
GPC3P51654 RNU6-1270P-201ENST00000517128 108 ntBASIC0.52□□□□□ -2.33
GPC3P51654 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
GPC3P51654 AP003072.1-201ENST00000531740 145 ntBASIC0.52□□□□□ -2.33
GPC3P51654 MIR8055-201ENST00000610739 97 ntBASIC0.52□□□□□ -2.33
GPC3P51654 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
GPC3P51654 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
GPC3P51654 SNORD45.3-201ENST00000363836 72 ntBASIC0.51□□□□□ -2.33
GPC3P51654 Y_RNA.199-201ENST00000364014 102 ntBASIC0.51□□□□□ -2.33
GPC3P51654 RNU6-728P-201ENST00000365375 104 ntBASIC0.51□□□□□ -2.33
GPC3P51654 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
GPC3P51654 Y_RNA.542-201ENST00000384641 111 ntBASIC0.51□□□□□ -2.33
GPC3P51654 RNU6-205P-201ENST00000390858 107 ntBASIC0.51□□□□□ -2.33
GPC3P51654 AL606845.1-201ENST00000404881 255 ntBASIC0.51□□□□□ -2.33
GPC3P51654 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
GPC3P51654 RNU7-80P-201ENST00000459562 61 ntBASIC0.51□□□□□ -2.33
GPC3P51654 RNU6-998P-201ENST00000515894 101 ntBASIC0.51□□□□□ -2.33
GPC3P51654 MIR6779-201ENST00000617283 64 ntBASIC0.51□□□□□ -2.33
GPC3P51654 RNU6-238P-201ENST00000363313 106 ntBASIC0.5□□□□□ -2.33
GPC3P51654 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
GPC3P51654 Y_RNA.262-201ENST00000364641 102 ntBASIC0.5□□□□□ -2.33
GPC3P51654 Y_RNA.326-201ENST00000365176 113 ntBASIC0.5□□□□□ -2.33
GPC3P51654 RNU4-17P-201ENST00000365598 141 ntBASIC0.5□□□□□ -2.33
GPC3P51654 Y_RNA.454-201ENST00000384224 113 ntBASIC0.5□□□□□ -2.33
GPC3P51654 Y_RNA.494-201ENST00000384432 111 ntBASIC0.5□□□□□ -2.33
GPC3P51654 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
GPC3P51654 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
GPC3P51654 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.5□□□□□ -2.33
GPC3P51654 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
GPC3P51654 SNRPGP8-201ENST00000454064 226 ntBASIC0.5□□□□□ -2.33
GPC3P51654 SNORD36C-201ENST00000516733 66 ntBASIC0.5□□□□□ -2.33
GPC3P51654 RNU6-1153P-201ENST00000516760 105 ntBASIC0.5□□□□□ -2.33
GPC3P51654 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.5□□□□□ -2.33
GPC3P51654 AL365265.1-201ENST00000621045 234 ntBASIC0.5□□□□□ -2.33
GPC3P51654 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
GPC3P51654 Y_RNA.149-201ENST00000363558 117 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR520F-201ENST00000384824 87 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR606-201ENST00000384851 96 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR548I3-201ENST00000408378 149 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR548H3-201ENST00000408771 118 ntBASIC0.49□□□□□ -2.33
GPC3P51654 AF228730.3-201ENST00000436691 102 ntBASIC0.49□□□□□ -2.33
GPC3P51654 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.49□□□□□ -2.33
GPC3P51654 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.49□□□□□ -2.33
GPC3P51654 MIR4771-2-201ENST00000577758 74 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR4771-1-201ENST00000582617 74 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
GPC3P51654 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
GPC3P51654 Y_RNA.440-201ENST00000384120 114 ntBASIC0.48□□□□□ -2.33
GPC3P51654 RNU6-1011P-201ENST00000384668 107 ntBASIC0.48□□□□□ -2.33
GPC3P51654 Y_RNA.556-201ENST00000384677 113 ntBASIC0.48□□□□□ -2.33
GPC3P51654 Y_RNA.572-201ENST00000384757 98 ntBASIC0.48□□□□□ -2.33
GPC3P51654 RNU6-913P-201ENST00000390913 95 ntBASIC0.48□□□□□ -2.33
GPC3P51654 MIR548F4-201ENST00000408515 105 ntBASIC0.48□□□□□ -2.33
GPC3P51654 Y_RNA.622-201ENST00000411091 108 ntBASIC0.48□□□□□ -2.33
GPC3P51654 AC244023.1-201ENST00000426884 112 ntBASIC0.48□□□□□ -2.33
GPC3P51654 RNU2-11P-201ENST00000459191 187 ntBASIC0.48□□□□□ -2.33
GPC3P51654 AL117187.1-201ENST00000555482 181 ntBASIC0.48□□□□□ -2.33
GPC3P51654 AC242498.1-201ENST00000604134 111 ntBASIC0.48□□□□□ -2.33
GPC3P51654 Y_RNA.91-201ENST00000363042 107 ntBASIC0.47□□□□□ -2.33
GPC3P51654 RNU6-1292P-201ENST00000383856 107 ntBASIC0.47□□□□□ -2.33
GPC3P51654 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
GPC3P51654 MT-TF-201ENST00000387314 71 ntBASIC0.47□□□□□ -2.33
GPC3P51654 MT-TT-201ENST00000387460 66 ntBASIC0.47□□□□□ -2.33
GPC3P51654 RNU6-381P-201ENST00000391259 108 ntBASIC0.47□□□□□ -2.33
GPC3P51654 RNU4-43P-201ENST00000410628 137 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms