Protein–RNA interactions for Protein: P50461

CSRP3, Cysteine and glycine-rich protein 3, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3P50461 RNU6-1144P-201ENST00000384247 104 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CSRP3P50461 SNORA79-201ENST00000408376 140 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 Y_RNA.621-201ENST00000411065 96 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.34□□□□□ -2.19
CSRP3P50461 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 RNU6-589P-201ENST00000516485 107 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 Y_RNA.690-201ENST00000516603 95 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 RNU6-365P-201ENST00000517113 106 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 RNU6-1270P-201ENST00000517128 108 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 AC090142.3-201ENST00000519012 385 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 AC090049.2-201ENST00000550377 109 ntBASIC1.34□□□□□ -2.19
CSRP3P50461 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
CSRP3P50461 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CSRP3P50461 RNU6-834P-201ENST00000362367 110 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 Y_RNA.68-201ENST00000362881 102 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 RNU6-268P-201ENST00000364174 107 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 U8.5-201ENST00000364528 136 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 SNORD58C-201ENST00000365223 64 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 SNORD24-201ENST00000383884 75 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 RNY1P4-201ENST00000384595 115 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CSRP3P50461 MIR1267-201ENST00000408723 78 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 RNU6-693P-201ENST00000516134 107 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 SNORD33.1-201ENST00000516213 88 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 RNU6-504P-201ENST00000516568 104 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 Y_RNA.692-201ENST00000516627 105 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 AL022345.2-201ENST00000606307 135 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 AC006441.5-201ENST00000612680 209 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 JPX_2.1-201ENST00000614161 69 ntBASIC1.33□□□□□ -2.2
CSRP3P50461 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CSRP3P50461 Y_RNA.494-201ENST00000384432 111 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 RNU6-476P-201ENST00000384726 107 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 RN7SKP200-201ENST00000410564 320 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 RNU6-1064P-201ENST00000410626 104 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 RNA5SP127-201ENST00000411051 133 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
CSRP3P50461 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 MIR4709-201ENST00000577272 72 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 MIR4662B-201ENST00000579498 81 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 MIR8054-201ENST00000620877 86 ntBASIC1.32□□□□□ -2.2
CSRP3P50461 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
CSRP3P50461 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSRP3P50461 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CSRP3P50461 RNU6-1298P-201ENST00000362456 101 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 SNORA4.2-201ENST00000365313 147 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 Y_RNA.547-201ENST00000384654 119 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 MT-TI-201ENST00000387365 69 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 RNU6-440P-201ENST00000390882 105 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 PDCD5P2-201ENST00000507570 312 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 RN7SKP19-201ENST00000516016 252 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 RNU7-25P-201ENST00000516544 62 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 SNORD36C-201ENST00000516733 66 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 RNU6-1149P-201ENST00000516810 97 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 Y_RNA.709-201ENST00000516952 92 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.31□□□□□ -2.2
CSRP3P50461 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.3□□□□□ -2.2
CSRP3P50461 SNORD68-201ENST00000363214 84 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 RNU6-1056P-201ENST00000383996 107 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 SNORA18.4-201ENST00000516440 124 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 SNORD45.4-201ENST00000516629 73 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 RNU7-28P-201ENST00000516759 62 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 SNORA28-201ENST00000606769 126 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 AC008133.2-201ENST00000624540 351 ntBASIC1.3□□□□□ -2.2
CSRP3P50461 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.3□□□□□ -2.2
CSRP3P50461 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CSRP3P50461 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSRP3P50461 RNU6-1123P-201ENST00000362347 106 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 Y_RNA.35-201ENST00000362601 101 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 RNU6-755P-201ENST00000364400 103 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 Y_RNA.433-201ENST00000384089 102 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 MIR216A-201ENST00000385063 110 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 SNORA26-201ENST00000391286 122 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 MIR548O-201ENST00000408583 114 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 AC245047.3-201ENST00000429428 127 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 CALM2P4-201ENST00000430810 426 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 PGBD4P5-201ENST00000445958 426 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 AC023449.1-201ENST00000454464 154 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 AC114811.1-201ENST00000507207 168 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 Y_RNA.757-201ENST00000578934 114 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
CSRP3P50461 RNU6-349P-201ENST00000362402 107 ntBASIC1.28□□□□□ -2.2
CSRP3P50461 Y_RNA.37-201ENST00000362606 108 ntBASIC1.28□□□□□ -2.2
CSRP3P50461 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
CSRP3P50461 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
CSRP3P50461 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms