Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR206-201ENST00000384872 86 ntBASIC3.5□□□□□ -1.85
PRIM1P49642 MIR548AR-201ENST00000582191 57 ntBASIC3.5□□□□□ -1.85
PRIM1P49642 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.5□□□□□ -1.85
PRIM1P49642 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PRIM1P49642 RNU6-1244P-201ENST00000363614 108 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 Y_RNA.567-201ENST00000384736 106 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 MIR627-201ENST00000384979 97 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 RNU6-913P-201ENST00000390913 95 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 RNA5SP465-201ENST00000391195 109 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 Y_RNA.609-201ENST00000410669 89 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 UBL5P1-201ENST00000507979 193 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 RNA5SP137-201ENST00000516833 135 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.49□□□□□ -1.85
PRIM1P49642 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.49□□□□□ -1.85
PRIM1P49642 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.48□□□□□ -1.85
PRIM1P49642 SNORD114-10-201ENST00000363409 72 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 MIR660-201ENST00000385235 97 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 MIR548G-201ENST00000408442 89 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 RNU2-7P-201ENST00000410794 178 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 Z98742.3-201ENST00000418637 326 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 AC245047.7-201ENST00000440265 293 ntBASIC3.48□□□□□ -1.85
PRIM1P49642 RNU6-480P-201ENST00000384332 107 ntBASIC3.47□□□□□ -1.85
PRIM1P49642 RNU6-1086P-201ENST00000410930 100 ntBASIC3.47□□□□□ -1.85
PRIM1P49642 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.47□□□□□ -1.85
PRIM1P49642 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.47□□□□□ -1.85
PRIM1P49642 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRIM1P49642 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PRIM1P49642 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRIM1P49642 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PRIM1P49642 SNORD115-37-201ENST00000363768 82 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 Y_RNA.316-201ENST00000365118 111 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 RNU6-602P-201ENST00000411155 105 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.46□□□□□ -1.86
PRIM1P49642 AC003982.1-202ENST00000469928 248 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 AC234781.5-201ENST00000508429 271 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.46□□□□□ -1.86
PRIM1P49642 MIR4709-201ENST00000577272 72 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 MIR8055-201ENST00000610739 97 ntBASIC3.46□□□□□ -1.86
PRIM1P49642 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.46□□□□□ -1.86
PRIM1P49642 Y_RNA.98-201ENST00000363109 102 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 Y_RNA.247-201ENST00000364500 92 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 RNU11-3P-201ENST00000391111 133 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 RNU6-1190P-201ENST00000410811 104 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 RPL23AP6-201ENST00000446637 472 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 RNU7-43P-201ENST00000516554 64 ntBASIC3.45□□□□□ -1.86
PRIM1P49642 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.45□□□□□ -1.86
PRIM1P49642 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRIM1P49642 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.44□□□□□ -1.86
PRIM1P49642 Y_RNA.191-201ENST00000363972 113 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 SNORD114-30-201ENST00000364448 72 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 MIR519C-201ENST00000385053 87 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.44□□□□□ -1.86
PRIM1P49642 AC104389.3-201ENST00000445629 235 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 SCARNA16.3-201ENST00000516595 184 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 RNU6-826P-201ENST00000516827 104 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 SNORA31.26-201ENST00000517250 137 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.44□□□□□ -1.86
PRIM1P49642 Z97988.1-201ENST00000637697 135 ntBASIC3.44□□□□□ -1.86
PRIM1P49642 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRIM1P49642 BX510359.4-201ENST00000423750 193 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 AC092427.1-202ENST00000430569 476 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 RN7SL499P-201ENST00000481141 276 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 AC093729.1-201ENST00000513074 128 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 RNA5SP320-201ENST00000516263 124 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 RNA5SP282-201ENST00000516355 108 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 SNORA74.3-201ENST00000517108 154 ntBASIC3.43□□□□□ -1.86
PRIM1P49642 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRIM1P49642 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRIM1P49642 MIR26A1-201ENST00000362205 77 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 RNU1-91P-201ENST00000364746 163 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 Y_RNA.448-201ENST00000384185 108 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 MIR34C-201ENST00000384831 77 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 SNORD28B-201ENST00000390993 75 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 AL023284.1-201ENST00000403956 276 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 SNORD88.1-201ENST00000408684 91 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 SPINT5P-201ENST00000448174 155 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 AC093850.1-201ENST00000454121 251 ntBASIC3.42□□□□□ -1.86
PRIM1P49642 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRIM1P49642 RNU6-457P-201ENST00000363999 107 ntBASIC3.41□□□□□ -1.86
PRIM1P49642 RNU6-788P-201ENST00000390967 104 ntBASIC3.41□□□□□ -1.86
PRIM1P49642 RNU4-53P-201ENST00000410828 140 ntBASIC3.41□□□□□ -1.86
PRIM1P49642 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.41□□□□□ -1.86
PRIM1P49642 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRIM1P49642 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
PRIM1P49642 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRIM1P49642 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PRIM1P49642 RNU6-342P-201ENST00000384521 104 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 SNORA48.1-201ENST00000390879 135 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 snoU13.27-201ENST00000459278 104 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 RNU7-79P-201ENST00000516082 62 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 CYP3A52P-201ENST00000563326 91 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 FAM106DP-201ENST00000586416 501 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 SNORD14A-201ENST00000606526 91 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 AC021506.2-201ENST00000612354 169 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 MIR8065-201ENST00000620577 100 ntBASIC3.4□□□□□ -1.87
PRIM1P49642 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRIM1P49642 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
PRIM1P49642 MIR424-201ENST00000362227 98 ntBASIC3.39□□□□□ -1.87
PRIM1P49642 Y_RNA.173-201ENST00000363776 113 ntBASIC3.39□□□□□ -1.87
PRIM1P49642 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms